PlantSME Plant secondary metabolism enzyme database

Rhododendron molle (rhododendron_molle)

Imported from atlas release summary for Rhododendron molle.

2155
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.86% Alkaloid pathway 22.6% Phenylpropanoid pathway 17.35% Flavonoid pathway 12.62% Steroid pathway 8.96% Rosmarinic acid pathway 7.61%
Family Distribution
C4H 5.96% BAHD 5.45% C3'H/CYP98A 5.36% UGT 5.34% 7DLGT 4.13% 4CL 3.87% UFGT 3.71% IFS 3.54%
Other Families 62.64%
More Families (97)
POD 162 3.17% CYP76 157 3.07% T3O 128 2.5% F3H 128 2.5% STR 117 2.29% CAS 111 2.17% NMT 107 2.09% CAD 105 2.05% DWF4/CYP90B1 95 1.86% BR6OX2/CYP85A2 91 1.78% F3'H/CYP75B 90 1.76% CODM/T6ODM 79 1.54% TPS 79 1.54% GES 78 1.52% SMT1/SMT2/SMT3 78 1.52% SGD 77 1.51% H6H 70 1.37% 7DLH 66 1.29% LAC 64 1.25% GS 50 0.98% IFR 50 0.98% HCT 48 0.94% TRI/TRII 47 0.92% RAS 46 0.9% 8HGO 45 0.88% IO 44 0.86% CYP71 44 0.86% CYP90D1 43 0.84% PYKS 40 0.78% CSE 38 0.74% T16H 36 0.7% ANR 36 0.7% G8O/G8H 35 0.68% TAT 35 0.68% BBE 33 0.65% CCR 32 0.63% FNS 31 0.61% BR6OX1/CYP85A1 29 0.57% COMT 28 0.55% CPD/CYP90A1 26 0.51% SLS 25 0.49% PMT 24 0.47% F3'5'H/CYP75A 24 0.47% ANS/LDOX 23 0.45% COR 19 0.37% DFR 19 0.37% F5H/CYP84A 19 0.37% NCS 18 0.35% 16OMT 18 0.35% CNMT 18 0.35% AACT 18 0.35% MPO 16 0.31% CCoAOMT 14 0.27% CHS 13 0.25% ROT3/CYP90C1 13 0.25% GPPS 13 0.25% CYP51G1 12 0.23% GGPPS 12 0.23% LAMT 10 0.2% HPPR 10 0.2% PAL 9 0.18% ISY 8 0.16% ODC 8 0.16% CPR 8 0.16% CYP719 7 0.14% CYP80B1 7 0.14% CHI 7 0.14% SMO1/SMO2 7 0.14% DWF1 7 0.14% FLS 6 0.12% SQS/FDFT1 6 0.12% HDR/IspH 6 0.12% MVD 6 0.12% DXS 6 0.12% XMT_MXMT_DXMT 5 0.1% SQE 5 0.1% FPPS 5 0.1% MVK 5 0.1% TDC 4 0.08% DET2 4 0.08% FK 4 0.08% MCT/IspD 4 0.08% HMGS 4 0.08% PMK 4 0.08% HMGR 4 0.08% 6OMT_4OMT_SOMT 3 0.06% TYDC_DDC 3 0.06% CPI1 3 0.06% MDS/IspF 3 0.06% CMK/IspE 2 0.04% DXR 2 0.04% ADC 1 0.02% HYD1 1 0.02% DWF5 1 0.02% DWF7 1 0.02% IDI 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 665 21 UGT (249) View species results
Alkaloid pathway 487 23 7DLGT (89) View species results
Phenylpropanoid pathway 374 13 POD (133) View species results
Flavonoid pathway 272 13 UFGT (180) View species results
Steroid pathway 193 13 CAS (103) View species results
Rosmarinic acid pathway 164 7 C4H (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1751 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 373 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
Reset
Gene Pathway Family Confidence Status Best Target
rhododendron_molle_KAI8569526.1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
rhododendron_molle_KAI8570232.1 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
rhododendron_molle_KAI8570233.1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
rhododendron_molle_KAI8570856.1 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
rhododendron_molle_KAI8571277.1 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
rhododendron_molle_KAI8572644.1 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
rhododendron_molle_KAI8574364.1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH