Scurrula parasitica var. graciliflora (scurrula_parasitica_var_graciliflora)
Imported from atlas release summary for Scurrula parasitica var. graciliflora.
705
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
705
Candidate Genes
BAHD
6.87%
C3'H/CYP98A
5.11%
C4H
4.58%
4CL
4.4%
POD
3.93%
UGT
3.41%
7DLGT
3.23%
UFGT
3.17%
Other Families
65.3%
More Families (94)
CYP76
52
3.05%
NMT
50
2.94%
IFS
50
2.94%
STR
45
2.64%
T3O
44
2.58%
F3H
43
2.52%
DWF4/CYP90B1
40
2.35%
CAD
39
2.29%
F3'H/CYP75B
35
2.06%
SMT1/SMT2/SMT3
33
1.94%
CODM/T6ODM
32
1.88%
IFR
31
1.82%
TRI/TRII
28
1.64%
CAS
27
1.59%
CYP71
26
1.53%
CSE
25
1.47%
GS
21
1.23%
PYKS
19
1.12%
LAC
19
1.12%
BR6OX2/CYP85A2
19
1.12%
CYP90D1
18
1.06%
GES
17
1.0%
TPS
17
1.0%
H6H
15
0.88%
RAS
15
0.88%
ANR
14
0.82%
G8O/G8H
13
0.76%
PMT
11
0.65%
T16H
11
0.65%
IO
10
0.59%
BBE
10
0.59%
SGD
10
0.59%
CCR
10
0.59%
FPPS
10
0.59%
AACT
10
0.59%
SLS
9
0.53%
PAL
9
0.53%
HCT
9
0.53%
8HGO
8
0.47%
7DLH
8
0.47%
CNMT
8
0.47%
DFR
8
0.47%
F5H/CYP84A
8
0.47%
TAT
8
0.47%
CPR
8
0.47%
COMT
7
0.41%
CPD/CYP90A1
7
0.41%
SQS/FDFT1
7
0.41%
ISY
6
0.35%
COR
6
0.35%
ANS/LDOX
6
0.35%
HPPR
6
0.35%
ROT3/CYP90C1
6
0.35%
BR6OX1/CYP85A1
6
0.35%
SQE
6
0.35%
NCS
5
0.29%
FNS
5
0.29%
CHS
5
0.29%
CYP51G1
5
0.29%
F3'5'H/CYP75A
4
0.23%
SMO1/SMO2
4
0.23%
GGPPS
4
0.23%
PMK
4
0.23%
CYP719
3
0.18%
MPO
3
0.18%
LAMT
3
0.18%
16OMT
3
0.18%
DET2
3
0.18%
HMGR
3
0.18%
MVK
3
0.18%
IDI
3
0.18%
MVD
3
0.18%
CMK/IspE
3
0.18%
TDC
2
0.12%
TYDC_DDC
2
0.12%
ODC
2
0.12%
CHI
2
0.12%
CCoAOMT
2
0.12%
HDS/IspG
2
0.12%
DXS
2
0.12%
HDR/IspH
2
0.12%
DXR
2
0.12%
HMGS
2
0.12%
ADC
1
0.06%
CYP80B1
1
0.06%
6OMT_4OMT_SOMT
1
0.06%
HYD1
1
0.06%
FK
1
0.06%
DWF5
1
0.06%
DWF1
1
0.06%
CPI1
1
0.06%
DWF7
1
0.06%
MCT/IspD
1
0.06%
MDS/IspF
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 205 | 19 | BAHD (85) | View species results |
| Alkaloid pathway | 168 | 19 | NMT (34) | View species results |
| Phenylpropanoid pathway | 133 | 11 | POD (54) | View species results |
| Flavonoid pathway | 90 | 9 | UFGT (51) | View species results |
| Rosmarinic acid pathway | 55 | 7 | C4H (23) | View species results |
| Steroid pathway | 54 | 12 | CAS (21) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 540 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 141 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| scurrula_parasitica_var._graciliflora_SPA17926 | Rosmarinic Acid | CPR | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA19440 | Rosmarinic Acid | CPR | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA19501 | Rosmarinic Acid | CPR | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA20826 | Rosmarinic Acid | CPR | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA22577 | Rosmarinic Acid | CPR | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA23018 | Rosmarinic Acid | CPR | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA14006 | Rosmarinic Acid | HPPR | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA14007 | Rosmarinic Acid | HPPR | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA19438 | Rosmarinic Acid | HPPR | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA20107 | Rosmarinic Acid | HPPR | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA23309 | Rosmarinic Acid | HPPR | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA25254 | Rosmarinic Acid | HPPR | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA13600 | Rosmarinic Acid | PAL | high | pass |
| scurrula_parasitica_var._graciliflora_SPA13602 | Rosmarinic Acid | PAL | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA18272 | Rosmarinic Acid | PAL | high | pass |
| scurrula_parasitica_var._graciliflora_SPA00320 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA00656 | Rosmarinic Acid | RAS | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA06136 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA08133 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA08406 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA09261 | Rosmarinic Acid | RAS | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA09519 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA10051 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA11269 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA15709 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA18400 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA18692 | Rosmarinic Acid | RAS | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA21492 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA21902 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA22078 | Rosmarinic Acid | RAS | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA00061 | Rosmarinic Acid | TAT | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA00063 | Rosmarinic Acid | TAT | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA01923 | Rosmarinic Acid | TAT | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA02803 | Rosmarinic Acid | TAT | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA03108 | Rosmarinic Acid | TAT | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA12721 | Rosmarinic Acid | TAT | medium | pass |
| scurrula_parasitica_var._graciliflora_SPA16095 | Rosmarinic Acid | TAT | low | borderline |
| scurrula_parasitica_var._graciliflora_SPA26377 | Rosmarinic Acid | TAT | medium | pass |