PlantSME Plant secondary metabolism enzyme database

Setaria italica (setaria_italica)

Imported from atlas release summary for Setaria italica.

2704
Candidate Protein Records
2421
Pathway-Level Records
5757
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 643 20 UGT (237) View species results
Alkaloid pathway 551 21 7DLGT (128) View species results
Phenylpropanoid pathway 495 11 POD (235) View species results
Flavonoid pathway 357 13 UFGT (227) View species results
Rosmarinic acid pathway 213 7 C4H (103) View species results
Steroid pathway 162 12 CAS (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2202 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 407 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sitascaffold_30103300.2 Alkaloid T16H medium borderline
Sitascaffold_30105940.1 Alkaloid T16H medium borderline
Sitascaffold_30118040.1 Alkaloid T16H medium borderline
Sitascaffold_40128420.2 Alkaloid T16H low borderline
Sitascaffold_40146840.1 Alkaloid T16H medium borderline
Sitascaffold_40146890.1 Alkaloid T16H medium borderline
Sitascaffold_50156900.1 Alkaloid T16H medium borderline
Sitascaffold_50160980.1 Alkaloid T16H medium borderline
Sitascaffold_50160980.2 Alkaloid T16H medium borderline
Sitascaffold_50192000.1 Alkaloid T16H medium borderline
Sitascaffold_60209160.1 Alkaloid T16H medium borderline
Sitascaffold_60210510.1 Alkaloid T16H medium borderline
Sitascaffold_60212810.1 Alkaloid T16H medium borderline
Sitascaffold_60220290.1 Alkaloid T16H medium borderline
Sitascaffold_60220310.1 Alkaloid T16H medium borderline
Sitascaffold_60220720.1 Alkaloid T16H medium borderline
Sitascaffold_60221190.1 Alkaloid T16H medium borderline
Sitascaffold_70230080.1 Alkaloid T16H medium borderline
Sitascaffold_70234130.1 Alkaloid T16H medium borderline
Sitascaffold_80275030.1 Alkaloid T16H medium borderline
Sitascaffold_80275940.1 Alkaloid T16H medium borderline
Sitascaffold_80277390.1 Alkaloid T16H medium borderline
Sitascaffold_80282600.1 Alkaloid T16H medium borderline
Sitascaffold_80285890.1 Alkaloid T16H medium borderline
Sitascaffold_90288820.1 Alkaloid T16H medium borderline
Sitascaffold_90288850.1 Alkaloid T16H medium borderline
Sitascaffold_90305370.1 Alkaloid T16H medium borderline
Sitascaffold_90306170.1 Alkaloid T16H low borderline
Sitascaffold_90307020.1 Alkaloid T16H medium borderline
Sitascaffold_90314320.1 Alkaloid T16H high pass
Sitascaffold_90317050.1 Alkaloid T16H medium borderline
Sitascaffold_90317050.2 Alkaloid T16H medium borderline
Sitascaffold_90323690.1 Alkaloid T16H medium borderline
Sitascaffold_90326290.1 Alkaloid T16H medium borderline
Sitascaffold_90326950.1 Alkaloid T16H medium borderline
Sitascaffold_90327040.1 Alkaloid T16H medium borderline
Sitascaffold_90328520.1 Alkaloid T16H medium borderline
Sitascaffold_10001940.1 Alkaloid T3O medium borderline
Sitascaffold_10005840.1 Alkaloid T3O medium borderline
Sitascaffold_10005850.1 Alkaloid T3O medium borderline
Sitascaffold_10005920.1 Alkaloid T3O medium borderline
Sitascaffold_10005930.1 Alkaloid T3O medium borderline
Sitascaffold_10013480.1 Alkaloid T3O medium borderline
Sitascaffold_10015500.1 Alkaloid T3O medium borderline
Sitascaffold_10015530.1 Alkaloid T3O medium borderline
Sitascaffold_10016490.1 Alkaloid T3O medium borderline
Sitascaffold_10021920.1 Alkaloid T3O medium pass
Sitascaffold_10027010.1 Alkaloid T3O low borderline
Sitascaffold_10028810.1 Alkaloid T3O medium pass
Sitascaffold_10036660.1 Alkaloid T3O low borderline