PlantSME Plant secondary metabolism enzyme database

Setaria italica (setaria_italica)

Imported from atlas release summary for Setaria italica.

2421
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 643 20 UGT (237) View species results
Alkaloid pathway 551 21 7DLGT (128) View species results
Phenylpropanoid pathway 495 11 POD (235) View species results
Flavonoid pathway 357 13 UFGT (227) View species results
Rosmarinic acid pathway 213 7 C4H (103) View species results
Steroid pathway 162 12 CAS (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2202 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 407 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Sitascaffold_70253720.1 Flavonoid ANR medium borderline
Sitascaffold_70253720.2 Flavonoid ANR medium borderline
Sitascaffold_80272020.1 Flavonoid ANR high pass
Sitascaffold_90291350.1 Flavonoid ANR medium borderline
Sitascaffold_90291360.1 Flavonoid ANR medium borderline
Sitascaffold_90291500.1 Flavonoid ANR medium borderline
Sitascaffold_90318570.1 Flavonoid ANR low borderline
Sitascaffold_90318570.2 Flavonoid ANR low borderline
Sitascaffold_90324720.1 Flavonoid ANR low borderline
Sitascaffold_90324760.1 Flavonoid ANR low borderline
Sitascaffold_90324770.1 Flavonoid ANR low borderline
Sitascaffold_90339220.2 Flavonoid ANR low borderline
Sitascaffold_20049300.1 Flavonoid ANS/LDOX medium borderline
Sitascaffold_30103340.1 Flavonoid ANS/LDOX low borderline
Sitascaffold_30103340.2 Flavonoid ANS/LDOX low borderline
Sitascaffold_40131910.1 Flavonoid ANS/LDOX low borderline
Sitascaffold_70236630.1 Flavonoid ANS/LDOX medium borderline
Sitascaffold_70254710.1 Flavonoid ANS/LDOX medium borderline
Sitascaffold_90312720.1 Flavonoid ANS/LDOX medium borderline
Sitascaffold_90320180.1 Flavonoid ANS/LDOX medium pass
Sitascaffold_90324440.1 Flavonoid ANS/LDOX medium borderline
Sitascaffold_10036730.1 Flavonoid C4H medium borderline
Sitascaffold_20081750.1 Flavonoid C4H medium borderline
Sitascaffold_30103280.1 Flavonoid C4H low borderline
Sitascaffold_50184390.1 Flavonoid C4H medium borderline
Sitascaffold_50184400.1 Flavonoid C4H medium borderline
Sitascaffold_50184400.2 Flavonoid C4H medium borderline
Sitascaffold_50192000.1 Flavonoid C4H medium borderline
Sitascaffold_90311810.1 Flavonoid C4H medium pass
Sitascaffold_20076480.1 Flavonoid CHI medium pass
Sitascaffold_30096210.1 Flavonoid CHI medium pass
Sitascaffold_70258900.1 Flavonoid CHI medium pass
Sitascaffold_80263680.1 Flavonoid CHI medium pass
Sitascaffold_90291170.1 Flavonoid CHI medium pass
Sitascaffold_10002920.1 Flavonoid CHS medium pass
Sitascaffold_10004240.1 Flavonoid CHS low borderline
Sitascaffold_20042530.1 Flavonoid CHS medium pass
Sitascaffold_20051660.1 Flavonoid CHS medium pass
Sitascaffold_20072730.1 Flavonoid CHS medium pass
Sitascaffold_20072740.1 Flavonoid CHS medium pass
Sitascaffold_20072770.1 Flavonoid CHS medium pass
Sitascaffold_20072780.1 Flavonoid CHS medium pass
Sitascaffold_70232400.1 Flavonoid CHS medium pass
Sitascaffold_70232410.1 Flavonoid CHS medium pass
Sitascaffold_70253670.1 Flavonoid CHS medium pass
Sitascaffold_80271970.1 Flavonoid CHS medium pass
Sitascaffold_80272910.1 Flavonoid CHS medium pass
Sitascaffold_80274930.1 Flavonoid CHS medium pass
Sitascaffold_80276280.1 Flavonoid CHS medium pass
Sitascaffold_80276300.1 Flavonoid CHS medium pass