PlantSME Plant secondary metabolism enzyme database

Siraitia grosvenorii (siraitia_grosvenorii)

Imported from atlas release summary for Siraitia grosvenorii.

1507
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.52% Alkaloid pathway 23.56% Phenylpropanoid pathway 17.65% Flavonoid pathway 13.8% Rosmarinic acid pathway 8.16% Steroid pathway 6.3%
Family Distribution
C4H 6.66% C3'H/CYP98A 5.48% BAHD 5.48% CYP76 4.55% UGT 4.15% 4CL 3.77% UFGT 3.74% 7DLGT 3.69%
Other Families 62.48%
More Families (96)
IFS 130 3.48% POD 120 3.21% T3O 96 2.57% F3H 89 2.38% DWF4/CYP90B1 87 2.33% NMT 78 2.09% CAD 73 1.95% F3'H/CYP75B 69 1.85% CAS 69 1.85% STR 62 1.66% TPS 61 1.63% PAL 60 1.6% GES 56 1.5% CODM/T6ODM 54 1.44% SMT1/SMT2/SMT3 53 1.42% BR6OX2/CYP85A2 51 1.36% H6H 47 1.26% SGD 44 1.18% HCT 40 1.07% TRI/TRII 38 1.02% T16H 38 1.02% G8O/G8H 36 0.96% FNS 36 0.96% IFR 35 0.94% PMT 33 0.88% CSE 32 0.86% COMT 31 0.83% IO 30 0.8% BBE 29 0.78% SLS 28 0.75% LAC 28 0.75% F5H/CYP84A 28 0.75% CYP90D1 27 0.72% CYP71 27 0.72% NCS 25 0.67% CCR 25 0.67% 16OMT 24 0.64% GS 24 0.64% PYKS 22 0.59% RAS 22 0.59% COR 19 0.51% ANR 18 0.48% BR6OX1/CYP85A1 18 0.48% F3'5'H/CYP75A 17 0.45% DFR 17 0.45% CYP80B1 16 0.43% TAT 15 0.4% LAMT 14 0.37% ANS/LDOX 14 0.37% 7DLH 13 0.35% 8HGO 13 0.35% CPD/CYP90A1 12 0.32% CYP719 11 0.29% ROT3/CYP90C1 11 0.29% CYP51G1 11 0.29% MPO 10 0.27% CPR 9 0.24% HMGR 9 0.24% CHS 8 0.21% SQE 8 0.21% FPPS 8 0.21% AACT 8 0.21% GGPPS 8 0.21% CNMT 6 0.16% HPPR 6 0.16% SQS/FDFT1 6 0.16% TYDC_DDC 5 0.13% CCoAOMT 5 0.13% DXS 5 0.13% PMK 5 0.13% DET2 4 0.11% SMO1/SMO2 3 0.08% IDI 3 0.08% MVK 3 0.08% GPPS 3 0.08% MVD 3 0.08% MCT/IspD 3 0.08% TDC 2 0.05% ADC 2 0.05% 6OMT_4OMT_SOMT 2 0.05% ODC 2 0.05% FLS 2 0.05% CHI 2 0.05% HYD1 2 0.05% DWF7 2 0.05% DWF1 2 0.05% CMK/IspE 2 0.05% HDS/IspG 2 0.05% HMGS 2 0.05% HDR/IspH 2 0.05% XMT_MXMT_DXMT 1 0.03% ISY 1 0.03% FK 1 0.03% DWF5 1 0.03% DXR 1 0.03% MDS/IspF 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 460 19 BAHD (148) View species results
Alkaloid pathway 355 21 7DLGT (79) View species results
Phenylpropanoid pathway 266 12 POD (92) View species results
Flavonoid pathway 208 12 UFGT (123) View species results
Rosmarinic acid pathway 123 7 C4H (41) View species results
Steroid pathway 95 12 CAS (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1380 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Gene Pathway Family Confidence Status Best Target
evm.TU.tig00153210.136_1_ORF1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00153238.1_1_ORF1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00153446.114_1_ORF1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00153490.94_1_ORF1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00153552.68_1_ORF1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00153577.44_1_ORF1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00153654.22_1_ORF1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00153661.29_1_ORF1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00153707.4_1_ORF1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00153807.5_2_ORF1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00154034.5_1_ORF1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
evm.TU.tig00154107.115_1_ORF1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR