Solanum stenotomum (solanum_stenotomum)
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Imported from atlas release summary for Solanum stenotomum.
2568
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2568
Candidate Genes
C3'H/CYP98A
6.77%
C4H
6.66%
BAHD
4.67%
UGT
4.62%
UFGT
4.54%
7DLGT
4.45%
T3O
4.0%
IFS
3.81%
Other Families
60.48%
More Families (98)
CYP76
234
3.63%
POD
213
3.3%
F3H
190
2.94%
4CL
183
2.84%
DWF4/CYP90B1
172
2.67%
BR6OX2/CYP85A2
167
2.59%
F3'H/CYP75B
165
2.56%
NMT
143
2.22%
CYP71
124
1.92%
CODM/T6ODM
117
1.81%
STR
87
1.35%
CAD
86
1.33%
TRI/TRII
85
1.32%
H6H
82
1.27%
SMT1/SMT2/SMT3
81
1.26%
CAS
80
1.24%
SGD
75
1.16%
7DLH
69
1.07%
TAT
69
1.07%
GES
66
1.02%
TPS
66
1.02%
IFR
59
0.91%
PAL
54
0.84%
LAC
54
0.84%
CSE
51
0.79%
GS
49
0.76%
COMT
48
0.74%
IO
45
0.7%
SLS
43
0.67%
CYP90D1
40
0.62%
PYKS
39
0.6%
T16H
39
0.6%
16OMT
39
0.6%
F3'5'H/CYP75A
37
0.57%
HCT
36
0.56%
ANR
34
0.53%
CCR
33
0.51%
LAMT
32
0.5%
RAS
31
0.48%
CYP51G1
30
0.46%
F5H/CYP84A
29
0.45%
CPD/CYP90A1
28
0.43%
G8O/G8H
27
0.42%
BBE
27
0.42%
FNS
27
0.42%
NCS
25
0.39%
TYDC_DDC
24
0.37%
PMT
22
0.34%
FPPS
19
0.29%
CCoAOMT
18
0.28%
BR6OX1/CYP85A1
18
0.28%
ANS/LDOX
17
0.26%
DFR
17
0.26%
CHS
16
0.25%
CNMT
15
0.23%
ROT3/CYP90C1
15
0.23%
SQS/FDFT1
14
0.22%
8HGO
12
0.19%
COR
12
0.19%
DET2
12
0.19%
GGPPS
11
0.17%
AACT
11
0.17%
MPO
10
0.15%
CYP80B1
8
0.12%
TDC
8
0.12%
CPR
8
0.12%
SQE
8
0.12%
CYP719
7
0.11%
MVD
7
0.11%
ISY
6
0.09%
HMGR
6
0.09%
CHI
5
0.08%
HMGS
5
0.08%
DXS
5
0.08%
PMK
5
0.08%
ODC
4
0.06%
SMO1/SMO2
4
0.06%
DWF1
4
0.06%
MVK
4
0.06%
XMT_MXMT_DXMT
3
0.05%
6OMT_4OMT_SOMT
3
0.05%
HPPR
3
0.05%
DWF7
3
0.05%
HDS/IspG
3
0.05%
ADC
2
0.03%
HYD1
2
0.03%
FK
2
0.03%
DWF5
2
0.03%
IDI
2
0.03%
CMK/IspE
2
0.03%
CYP80F1
1
0.02%
FLS
1
0.02%
CPI1
1
0.02%
MDS/IspF
1
0.02%
GPPS
1
0.02%
DXR
1
0.02%
MCT/IspD
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 744 | 19 | UGT (283) | View species results |
| Alkaloid pathway | 578 | 22 | 7DLGT (118) | View species results |
| Phenylpropanoid pathway | 480 | 11 | POD (210) | View species results |
| Flavonoid pathway | 371 | 12 | UFGT (274) | View species results |
| Rosmarinic acid pathway | 241 | 7 | C4H (125) | View species results |
| Steroid pathway | 154 | 13 | CAS (65) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2669 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 368 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| solanum_stenotomum_XP_049408978.1 | Rosmarinic Acid | 4CL | medium | pass |
| solanum_stenotomum_XP_049408979.1 | Rosmarinic Acid | 4CL | medium | pass |
| solanum_stenotomum_XP_049410329.1 | Rosmarinic Acid | 4CL | medium | pass |
| solanum_stenotomum_XP_049410895.1 | Rosmarinic Acid | 4CL | medium | pass |
| solanum_stenotomum_XP_049411478.1 | Rosmarinic Acid | 4CL | medium | pass |
| solanum_stenotomum_XP_049412797.1 | Rosmarinic Acid | 4CL | low | borderline |
| solanum_stenotomum_XP_049414094.1 | Rosmarinic Acid | 4CL | medium | pass |
| solanum_stenotomum_XP_049414095.1 | Rosmarinic Acid | 4CL | medium | pass |
| solanum_stenotomum_XP_049414202.1 | Rosmarinic Acid | 4CL | low | borderline |
| solanum_stenotomum_XP_049415010.1 | Rosmarinic Acid | 4CL | low | borderline |
| solanum_stenotomum_XP_049415101.1 | Rosmarinic Acid | 4CL | medium | pass |
| solanum_stenotomum_XP_049376284.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049376285.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049376399.1 | Rosmarinic Acid | C4H | medium | pass |
| solanum_stenotomum_XP_049376620.1 | Rosmarinic Acid | C4H | medium | pass |
| solanum_stenotomum_XP_049377172.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049377182.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049377206.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049377257.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049377529.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049377671.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049377672.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049377702.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049378258.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049378355.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049379017.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049379640.1 | Rosmarinic Acid | C4H | medium | pass |
| solanum_stenotomum_XP_049379673.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049379674.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049379956.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049380006.1 | Rosmarinic Acid | C4H | medium | pass |
| solanum_stenotomum_XP_049380295.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049380725.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049380807.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049380888.1 | Rosmarinic Acid | C4H | medium | pass |
| solanum_stenotomum_XP_049381551.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049381643.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049381647.1 | Rosmarinic Acid | C4H | medium | pass |
| solanum_stenotomum_XP_049381648.1 | Rosmarinic Acid | C4H | medium | pass |
| solanum_stenotomum_XP_049382769.1 | Rosmarinic Acid | C4H | medium | pass |
| solanum_stenotomum_XP_049383024.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049383034.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049383069.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049383250.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049383384.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049383385.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049383642.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049383652.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049383658.1 | Rosmarinic Acid | C4H | low | borderline |
| solanum_stenotomum_XP_049384044.1 | Rosmarinic Acid | C4H | medium | pass |