PlantSME Plant secondary metabolism enzyme database

Sorghum bicolor (sorghum_bicolor)

Imported from atlas release summary for Sorghum bicolor.

2872
Candidate Protein Records
2546
Pathway-Level Records
6189
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 647 19 BAHD (232) View species results
Alkaloid pathway 626 25 7DLGT (108) View species results
Phenylpropanoid pathway 495 11 POD (236) View species results
Flavonoid pathway 346 11 UFGT (219) View species results
Rosmarinic acid pathway 230 7 C4H (106) View species results
Steroid pathway 202 11 CAS (99) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 439 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Sbic03G0040860.1 Alkaloid T3O medium pass
Sbic03G0044920.1 Alkaloid T3O low borderline
Sbic04G0000580.1 Alkaloid T3O medium pass
Sbic04G0007100.1 Alkaloid T3O medium borderline
Sbic04G0007100.2 Alkaloid T3O medium borderline
Sbic04G0007110.1 Alkaloid T3O medium borderline
Sbic04G0007130.1 Alkaloid T3O medium borderline
Sbic04G0007140.1 Alkaloid T3O medium borderline
Sbic04G0007220.1 Alkaloid T3O medium borderline
Sbic04G0011310.1 Alkaloid T3O medium borderline
Sbic04G0014560.1 Alkaloid T3O medium borderline
Sbic04G0020840.1 Alkaloid T3O medium borderline
Sbic04G0020870.1 Alkaloid T3O medium borderline
Sbic04G0020890.1 Alkaloid T3O medium borderline
Sbic04G0021080.1 Alkaloid T3O medium pass
Sbic04G0028110.1 Alkaloid T3O medium pass
Sbic04G0029740.1 Alkaloid T3O low borderline
Sbic04G0030250.1 Alkaloid T3O low borderline
Sbic04G0036310.1 Alkaloid T3O medium pass
Sbic04G0037000.1 Alkaloid T3O medium pass
Sbic05G0003020.1 Alkaloid T3O medium pass
Sbic05G0006470.1 Alkaloid T3O medium borderline
Sbic05G0006470.2 Alkaloid T3O medium borderline
Sbic05G0011330.1 Alkaloid T3O medium pass
Sbic05G0016820.1 Alkaloid T3O medium borderline
Sbic05G0017120.1 Alkaloid T3O medium pass
Sbic05G0017140.1 Alkaloid T3O medium pass
Sbic05G0017210.1 Alkaloid T3O medium pass
Sbic05G0017210.2 Alkaloid T3O medium pass
Sbic05G0017210.3 Alkaloid T3O medium pass
Sbic05G0017210.4 Alkaloid T3O medium pass
Sbic05G0017210.5 Alkaloid T3O medium pass
Sbic05G0017210.6 Alkaloid T3O medium pass
Sbic05G0017690.1 Alkaloid T3O medium pass
Sbic05G0017690.2 Alkaloid T3O medium pass
Sbic05G0017700.1 Alkaloid T3O medium borderline
Sbic05G0020230.1 Alkaloid T3O medium pass
Sbic05G0020230.2 Alkaloid T3O medium pass
Sbic05G0021660.1 Alkaloid T3O medium borderline
Sbic05G0021700.1 Alkaloid T3O medium borderline
Sbic05G0022850.1 Alkaloid T3O medium borderline
Sbic05G0023970.1 Alkaloid T3O medium borderline
Sbic06G0000090.1 Alkaloid T3O medium borderline
Sbic06G0001090.1 Alkaloid T3O medium borderline
Sbic06G0003540.1 Alkaloid T3O medium borderline
Sbic06G0004630.1 Alkaloid T3O medium borderline
Sbic06G0004660.1 Alkaloid T3O medium borderline
Sbic06G0012620.1 Alkaloid T3O medium borderline
Sbic06G0014260.1 Alkaloid T3O medium borderline
Sbic06G0018490.1 Alkaloid T3O low borderline