PlantSME Plant secondary metabolism enzyme database

Sorghum bicolor (sorghum_bicolor)

Imported from atlas release summary for Sorghum bicolor.

2872
Candidate Protein Records
2546
Pathway-Level Records
6189
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 647 19 BAHD (232) View species results
Alkaloid pathway 626 25 7DLGT (108) View species results
Phenylpropanoid pathway 495 11 POD (236) View species results
Flavonoid pathway 346 11 UFGT (219) View species results
Rosmarinic acid pathway 230 7 C4H (106) View species results
Steroid pathway 202 11 CAS (99) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 439 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Sbic06G0019170.1 Alkaloid T3O medium pass
Sbic06G0019180.1 Alkaloid T3O medium pass
Sbic06G0019180.3 Alkaloid T3O medium pass
Sbic07G0000340.1 Alkaloid T3O medium borderline
Sbic07G0000350.1 Alkaloid T3O medium borderline
Sbic07G0000360.1 Alkaloid T3O medium borderline
Sbic07G0000370.1 Alkaloid T3O medium borderline
Sbic07G0000370.2 Alkaloid T3O medium borderline
Sbic07G0000390.1 Alkaloid T3O medium borderline
Sbic07G0003580.1 Alkaloid T3O medium borderline
Sbic07G0004710.1 Alkaloid T3O medium borderline
Sbic07G0006680.1 Alkaloid T3O medium pass
Sbic07G0007460.1 Alkaloid T3O medium borderline
Sbic07G0009830.1 Alkaloid T3O medium borderline
Sbic07G0009990.1 Alkaloid T3O low borderline
Sbic07G0010030.1 Alkaloid T3O medium pass
Sbic07G0013430.1 Alkaloid T3O medium borderline
Sbic07G0013990.2 Alkaloid T3O medium borderline
Sbic07G0015690.1 Alkaloid T3O medium borderline
Sbic07G0015700.1 Alkaloid T3O medium borderline
Sbic07G0016050.1 Alkaloid T3O medium borderline
Sbic07G0016060.1 Alkaloid T3O medium borderline
Sbic07G0016450.1 Alkaloid T3O medium pass
Sbic07G0018700.1 Alkaloid T3O medium borderline
Sbic08G0001520.1 Alkaloid T3O medium pass
Sbic08G0004060.1 Alkaloid T3O medium borderline
Sbic08G0004060.2 Alkaloid T3O medium borderline
Sbic08G0004060.3 Alkaloid T3O medium borderline
Sbic08G0005990.1 Alkaloid T3O medium borderline
Sbic08G0011170.1 Alkaloid T3O medium borderline
Sbic08G0011220.1 Alkaloid T3O medium borderline
Sbic08G0011320.1 Alkaloid T3O medium borderline
Sbic08G0011320.2 Alkaloid T3O medium borderline
Sbic08G0011320.3 Alkaloid T3O medium borderline
Sbic08G0011330.1 Alkaloid T3O medium borderline
Sbic08G0012940.1 Alkaloid T3O medium pass
Sbic08G0014350.1 Alkaloid T3O medium borderline
Sbic08G0015210.1 Alkaloid T3O medium borderline
Sbic08G0015230.1 Alkaloid T3O medium borderline
Sbic09G0000070.2 Alkaloid T3O medium pass
Sbic09G0000070.3 Alkaloid T3O medium pass
Sbic09G0006590.1 Alkaloid T3O medium borderline
Sbic09G0006880.1 Alkaloid T3O medium pass
Sbic09G0007730.1 Alkaloid T3O medium pass
Sbic09G0012500.1 Alkaloid T3O medium pass
Sbic09G0014480.1 Alkaloid T3O medium pass
Sbic09G0014660.1 Alkaloid T3O medium borderline
Sbic09G0015940.1 Alkaloid T3O low borderline
Sbic09G0016710.1 Alkaloid T3O medium borderline
Sbic09G0018200.1 Alkaloid T3O medium pass