PlantSME Plant secondary metabolism enzyme database

Sorghum bicolor (sorghum_bicolor)

Imported from atlas release summary for Sorghum bicolor.

2872
Candidate Protein Records
2546
Pathway-Level Records
6189
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 647 19 BAHD (232) View species results
Alkaloid pathway 626 25 7DLGT (108) View species results
Phenylpropanoid pathway 495 11 POD (236) View species results
Flavonoid pathway 346 11 UFGT (219) View species results
Rosmarinic acid pathway 230 7 C4H (106) View species results
Steroid pathway 202 11 CAS (99) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 439 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sbic07G0005810.1 Alkaloid GES medium pass
Sbic07G0005820.1 Alkaloid GES medium pass
Sbic07G0005830.1 Alkaloid GES medium pass
Sbic07G0005840.1 Alkaloid GES medium pass
Sbic07G0006700.1 Alkaloid GES medium pass
Sbic07G0014020.1 Alkaloid GES medium pass
Sbic07G0019550.1 Alkaloid GES medium pass
Sbic09G0000870.1 Alkaloid GES medium pass
Sbic09G0000890.1 Alkaloid GES medium pass
Sbic09G0000890.2 Alkaloid GES medium pass
Sbic09G0000900.1 Alkaloid GES medium pass
Sbic09G0000900.2 Alkaloid GES medium pass
Sbic09G0000900.3 Alkaloid GES medium pass
Sbic01G0057170.1 Alkaloid GS low borderline
Sbic02G0019980.1 Alkaloid GS high pass
Sbic02G0019990.1 Alkaloid GS low borderline
Sbic02G0020000.1 Alkaloid GS high pass
Sbic02G0020010.1 Alkaloid GS high pass
Sbic02G0026100.1 Alkaloid GS low borderline
Sbic02G0026130.1 Alkaloid GS low borderline
Sbic02G0026130.2 Alkaloid GS low borderline
Sbic03G0031430.1 Alkaloid GS low borderline
Sbic04G0007350.1 Alkaloid GS medium pass
Sbic04G0007350.2 Alkaloid GS medium pass
Sbic04G0035370.1 Alkaloid GS low borderline
Sbic05G0014990.1 Alkaloid GS low borderline
Sbic06G0001550.1 Alkaloid GS high pass
Sbic06G0004360.1 Alkaloid GS low borderline
Sbic06G0022060.1 Alkaloid GS high pass
Sbic06G0022060.2 Alkaloid GS high pass
Sbic06G0022060.3 Alkaloid GS high pass
Sbic06G0023210.1 Alkaloid GS low borderline
Sbic07G0000960.1 Alkaloid GS medium pass
Sbic07G0007910.1 Alkaloid GS high pass
Sbic07G0012250.1 Alkaloid GS low borderline
Sbic07G0012250.2 Alkaloid GS low borderline
Sbic07G0019010.1 Alkaloid GS medium pass
Sbic07G0019010.2 Alkaloid GS medium pass
Sbic08G0011590.1 Alkaloid GS high pass
Sbic10G0007330.1 Alkaloid GS high pass
Sbic10G0007340.1 Alkaloid GS high pass
Sbic10G0007350.1 Alkaloid GS high pass
Sbic10G0007360.1 Alkaloid GS high pass
Sbic10G0007370.1 Alkaloid GS medium pass
Sbic10G0007370.2 Alkaloid GS medium pass
Sbic01G0000610.1 Alkaloid H6H medium borderline
Sbic01G0000620.1 Alkaloid H6H medium borderline
Sbic01G0031450.1 Alkaloid H6H medium borderline
Sbic01G0033120.1 Alkaloid H6H medium borderline
Sbic01G0033810.1 Alkaloid H6H low borderline