PlantSME Plant secondary metabolism enzyme database

Sorghum bicolor (sorghum_bicolor)

Imported from atlas release summary for Sorghum bicolor.

2872
Candidate Protein Records
2546
Pathway-Level Records
6189
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 647 19 BAHD (232) View species results
Alkaloid pathway 626 25 7DLGT (108) View species results
Phenylpropanoid pathway 495 11 POD (236) View species results
Flavonoid pathway 346 11 UFGT (219) View species results
Rosmarinic acid pathway 230 7 C4H (106) View species results
Steroid pathway 202 11 CAS (99) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 439 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Sbic02G0030590.1 Terpenoid FPPS medium pass
Sbic03G0028440.1 Terpenoid FPPS medium pass
Sbic03G0038030.1 Terpenoid FPPS medium pass
Sbic06G0025890.1 Terpenoid FPPS medium pass
Sbic09G0022430.1 Terpenoid FPPS medium pass
Sbic10G0005500.1 Terpenoid FPPS medium pass
Sbic10G0005500.2 Terpenoid FPPS medium pass
Sbic10G0005500.3 Terpenoid FPPS medium pass
Sbic10G0005500.4 Terpenoid FPPS medium pass
Sbic02G0036150.1 Terpenoid GGPPS medium borderline
Sbic03G0011640.1 Terpenoid GGPPS medium borderline
Sbic04G0030130.1 Terpenoid GGPPS medium borderline
Sbic07G0007290.1 Terpenoid GGPPS medium borderline
Sbic07G0007290.2 Terpenoid GGPPS medium borderline
Sbic07G0007290.3 Terpenoid GGPPS medium borderline
Sbic07G0007290.4 Terpenoid GGPPS medium borderline
Sbic07G0007290.5 Terpenoid GGPPS medium borderline
Sbic08G0009180.1 Terpenoid GGPPS medium borderline
Sbic09G0025460.1 Terpenoid GGPPS medium borderline
Sbic10G0024180.1 Terpenoid GGPPS medium borderline
Sbic10G0024180.2 Terpenoid GGPPS medium borderline
Sbic01G0010570.1 Terpenoid HDR/IspH low borderline
Sbic01G0010580.1 Terpenoid HDR/IspH high pass
Sbic06G0023970.1 Terpenoid HDR/IspH low borderline
Sbic06G0023970.2 Terpenoid HDR/IspH low borderline
Sbic06G0023970.3 Terpenoid HDR/IspH low borderline
Sbic06G0023970.4 Terpenoid HDR/IspH low borderline
Sbic04G0021580.1 Terpenoid HDS/IspG high pass
Sbic02G0025570.1 Terpenoid HMGR medium pass
Sbic04G0027410.1 Terpenoid HMGR medium pass
Sbic07G0021660.1 Terpenoid HMGR medium pass
Sbic10G0007750.1 Terpenoid HMGR low borderline
Sbic01G0055720.1 Terpenoid HMGS high pass
Sbic02G0027500.1 Terpenoid HMGS high pass
Sbic07G0019050.1 Terpenoid HMGS high pass
Sbic02G0033840.1 Terpenoid IDI medium pass
Sbic09G0014160.1 Terpenoid IDI medium pass
Sbic02G0034770.1 Terpenoid MCT/IspD low borderline
Sbic03G0040160.1 Terpenoid MCT/IspD high pass
Sbic05G0017830.1 Terpenoid MCT/IspD low borderline
Sbic06G0022190.1 Terpenoid MCT/IspD low borderline
Sbic07G0007850.1 Terpenoid MCT/IspD low borderline
Sbic04G0029500.1 Terpenoid MDS/IspF high pass
Sbic01G0026140.1 Terpenoid MVD low borderline
Sbic01G0053630.1 Terpenoid MVD low borderline
Sbic04G0034700.1 Terpenoid MVD medium pass
Sbic08G0003890.1 Terpenoid MVD low borderline
Sbic01G0002610.1 Terpenoid MVK low borderline
Sbic01G0056040.1 Terpenoid MVK low borderline
Sbic04G0001240.1 Terpenoid MVK medium pass