PlantSME Plant secondary metabolism enzyme database

Sorghum bicolor (sorghum_bicolor)

Imported from atlas release summary for Sorghum bicolor.

2546
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 647 19 BAHD (232) View species results
Alkaloid pathway 626 25 7DLGT (108) View species results
Phenylpropanoid pathway 495 11 POD (236) View species results
Flavonoid pathway 346 11 UFGT (219) View species results
Rosmarinic acid pathway 230 7 C4H (106) View species results
Steroid pathway 202 11 CAS (99) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 439 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Sbic06G0027690.2 Rosmarinic Acid 4CL medium pass
Sbic06G0028470.1 Rosmarinic Acid 4CL medium pass
Sbic07G0003020.1 Rosmarinic Acid 4CL low borderline
Sbic07G0009290.1 Rosmarinic Acid 4CL medium pass
Sbic07G0015340.1 Rosmarinic Acid 4CL medium pass
Sbic08G0001080.1 Rosmarinic Acid 4CL low borderline
Sbic08G0005250.1 Rosmarinic Acid 4CL low borderline
Sbic08G0005250.2 Rosmarinic Acid 4CL low borderline
Sbic09G0003170.1 Rosmarinic Acid 4CL low borderline
Sbic09G0003170.2 Rosmarinic Acid 4CL low borderline
Sbic10G0000910.1 Rosmarinic Acid 4CL low borderline
Sbic10G0000910.2 Rosmarinic Acid 4CL low borderline
Sbic10G0000910.3 Rosmarinic Acid 4CL low borderline
Sbic10G0000910.4 Rosmarinic Acid 4CL low borderline
Sbic10G0000910.5 Rosmarinic Acid 4CL low borderline
Sbic10G0000910.6 Rosmarinic Acid 4CL low borderline
Sbic10G0000910.7 Rosmarinic Acid 4CL low borderline
Sbic10G0000910.8 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.1 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.10 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.11 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.12 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.13 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.14 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.15 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.16 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.17 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.18 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.19 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.2 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.3 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.4 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.5 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.6 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.7 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.8 Rosmarinic Acid 4CL low borderline
Sbic10G0004590.9 Rosmarinic Acid 4CL low borderline
Sbic10G0004600.1 Rosmarinic Acid 4CL low borderline
Sbic10G0011570.1 Rosmarinic Acid 4CL medium pass
Sbic10G0011590.1 Rosmarinic Acid 4CL medium pass
Sbic10G0013730.1 Rosmarinic Acid 4CL medium pass
Sbic10G0022610.1 Rosmarinic Acid 4CL medium pass
Sbic01G0001180.1 Rosmarinic Acid C4H medium pass
Sbic01G0001200.1 Rosmarinic Acid C4H medium pass
Sbic01G0001210.1 Rosmarinic Acid C4H low borderline
Sbic01G0001830.1 Rosmarinic Acid C4H low borderline
Sbic01G0001880.1 Rosmarinic Acid C4H low borderline
Sbic01G0002280.1 Rosmarinic Acid C4H low borderline
Sbic01G0004490.1 Rosmarinic Acid C4H low borderline
Sbic01G0008370.1 Rosmarinic Acid C4H medium pass