Sorghum bicolor (sorghum_bicolor)
Imported from atlas release summary for Sorghum bicolor.
2872
Candidate Protein Records
2546
Pathway-Level Records
6189
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
6189
Family-Level Calls
C3'H/CYP98A
6.37%
C4H
5.61%
BAHD
4.96%
4CL
4.46%
POD
4.01%
UGT
3.85%
UFGT
3.67%
7DLGT
3.64%
Other Families
63.45%
More Families (97)
IFS
224
3.62%
T3O
216
3.49%
CYP76
212
3.43%
F3'H/CYP75B
149
2.41%
NMT
146
2.36%
BR6OX2/CYP85A2
135
2.18%
DWF4/CYP90B1
134
2.17%
F3H
131
2.12%
CAS
126
2.04%
CYP71
109
1.76%
STR
106
1.71%
SMT1/SMT2/SMT3
100
1.62%
CAD
86
1.39%
SGD
80
1.29%
TPS
78
1.26%
GES
76
1.23%
PYKS
74
1.2%
SLS
69
1.11%
ANR
68
1.1%
HCT
68
1.1%
TRI/TRII
64
1.03%
RAS
64
1.03%
H6H
62
1.0%
PMT
61
0.99%
CCR
60
0.97%
COMT
58
0.94%
CODM/T6ODM
57
0.92%
CYP51G1
56
0.9%
T16H
55
0.89%
CSE
52
0.84%
16OMT
49
0.79%
LAC
49
0.79%
NCS
48
0.78%
IFR
46
0.74%
CYP90D1
45
0.73%
CHS
42
0.68%
G8O/G8H
33
0.53%
FNS
33
0.53%
GS
32
0.52%
IO
30
0.48%
CPD/CYP90A1
30
0.48%
PAL
27
0.44%
DFR
27
0.44%
TAT
27
0.44%
COR
26
0.42%
BBE
22
0.36%
F3'5'H/CYP75A
22
0.36%
F5H/CYP84A
22
0.36%
BR6OX1/CYP85A1
22
0.36%
8HGO
20
0.32%
CNMT
18
0.29%
LAMT
17
0.27%
MPO
15
0.24%
HPPR
15
0.24%
TYDC_DDC
13
0.21%
ANS/LDOX
13
0.21%
FPPS
13
0.21%
XMT_MXMT_DXMT
12
0.19%
SMO1/SMO2
12
0.19%
GGPPS
12
0.19%
7DLH
11
0.18%
AACT
11
0.18%
CYP719
10
0.16%
CCoAOMT
10
0.16%
CYP80B1
9
0.15%
ROT3/CYP90C1
9
0.15%
SQS/FDFT1
7
0.11%
CPR
6
0.1%
HYD1
6
0.1%
HDR/IspH
6
0.1%
ODC
5
0.08%
DWF1
5
0.08%
MCT/IspD
5
0.08%
ISY
4
0.06%
FLS
4
0.06%
DET2
4
0.06%
MVK
4
0.06%
MVD
4
0.06%
DXS
4
0.06%
HMGR
4
0.06%
6OMT_4OMT_SOMT
3
0.05%
CYP80F1
3
0.05%
CHI
3
0.05%
CPI1
3
0.05%
HMGS
3
0.05%
TDC
2
0.03%
PMK
2
0.03%
IDI
2
0.03%
DXR
2
0.03%
ADC
1
0.02%
SQE
1
0.02%
FK
1
0.02%
DWF7
1
0.02%
DWF5
1
0.02%
CMK/IspE
1
0.02%
HDS/IspG
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 647 | 19 | BAHD (232) | View species results |
| Alkaloid pathway | 626 | 25 | 7DLGT (108) | View species results |
| Phenylpropanoid pathway | 495 | 11 | POD (236) | View species results |
| Flavonoid pathway | 346 | 11 | UFGT (219) | View species results |
| Rosmarinic acid pathway | 230 | 7 | C4H (106) | View species results |
| Steroid pathway | 202 | 11 | CAS (99) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2346 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 439 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Sbic10G0007080.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Sbic10G0007120.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Sbic10G0007130.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Sbic10G0007140.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Sbic10G0007150.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Sbic10G0019300.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Sbic01G0000030.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0000030.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0000030.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0000030.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0000030.5 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0000030.6 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0009020.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sbic01G0019780.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0019780.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0019790.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0019790.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0021580.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0024460.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0024460.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0032700.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sbic01G0039330.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sbic01G0043310.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic01G0044900.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sbic01G0052430.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic02G0011090.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic02G0017120.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic02G0017760.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic02G0019050.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sbic02G0019070.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sbic02G0020850.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic02G0023990.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic02G0032910.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic02G0032910.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic02G0032910.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic02G0038160.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sbic02G0038160.2 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sbic02G0038170.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sbic03G0004810.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0004810.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0009770.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0022570.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0022590.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0022610.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0022630.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0022630.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0022650.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0022670.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0022680.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sbic03G0022690.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |