Strobilanthes cusia (strobilanthes_cusia)
Imported from atlas release summary for Strobilanthes cusia.
1708
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1708
Candidate Genes
C4H
6.75%
C3'H/CYP98A
6.6%
BAHD
5.24%
IFS
4.34%
UGT
4.13%
T3O
4.09%
7DLGT
3.86%
UFGT
3.84%
Other Families
61.15%
More Families (97)
4CL
163
3.68%
CYP76
161
3.64%
POD
137
3.09%
F3H
117
2.64%
DWF4/CYP90B1
111
2.51%
F3'H/CYP75B
96
2.17%
BR6OX2/CYP85A2
89
2.01%
CAD
87
1.97%
TPS
76
1.72%
STR
69
1.56%
NMT
69
1.56%
GES
69
1.56%
CYP71
69
1.56%
CODM/T6ODM
68
1.54%
CAS
55
1.24%
BBE
50
1.13%
H6H
50
1.13%
TRI/TRII
48
1.08%
SMT1/SMT2/SMT3
46
1.04%
CYP90D1
42
0.95%
IFR
40
0.9%
ANR
38
0.86%
RAS
38
0.86%
7DLH
36
0.81%
LAC
35
0.79%
PYKS
34
0.77%
HCT
34
0.77%
SGD
32
0.72%
SLS
31
0.7%
PMT
31
0.7%
CSE
31
0.7%
GS
30
0.68%
CPD/CYP90A1
29
0.66%
G8O/G8H
26
0.59%
IO
26
0.59%
T16H
25
0.56%
TAT
25
0.56%
COMT
24
0.54%
NCS
23
0.52%
LAMT
22
0.5%
16OMT
21
0.47%
F3'5'H/CYP75A
21
0.47%
PAL
21
0.47%
CCR
20
0.45%
8HGO
19
0.43%
ROT3/CYP90C1
18
0.41%
CYP51G1
17
0.38%
CNMT
15
0.34%
FNS
15
0.34%
F5H/CYP84A
15
0.34%
COR
14
0.32%
GGPPS
12
0.27%
FPPS
12
0.27%
BR6OX1/CYP85A1
11
0.25%
SQE
11
0.25%
HPPR
10
0.23%
CPR
9
0.2%
AACT
9
0.2%
MPO
8
0.18%
TDC
8
0.18%
DFR
8
0.18%
ANS/LDOX
8
0.18%
CCoAOMT
8
0.18%
CYP719
7
0.16%
CHS
7
0.16%
SMO1/SMO2
7
0.16%
SQS/FDFT1
7
0.16%
DXS
7
0.16%
ISY
6
0.14%
CYP80B1
6
0.14%
DET2
6
0.14%
HMGR
5
0.11%
MVK
5
0.11%
DWF1
4
0.09%
MVD
4
0.09%
HDR/IspH
4
0.09%
TYDC_DDC
3
0.07%
ADC
3
0.07%
CHI
3
0.07%
DXR
3
0.07%
HDS/IspG
3
0.07%
ODC
2
0.05%
CPI1
2
0.05%
DWF7
2
0.05%
HYD1
2
0.05%
IDI
2
0.05%
PMK
2
0.05%
HMGS
2
0.05%
MDS/IspF
2
0.05%
CMK/IspE
2
0.05%
XMT_MXMT_DXMT
1
0.02%
CYP80F1
1
0.02%
FLS
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
MCT/IspD
1
0.02%
GPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 542 | 19 | BAHD (184) | View species results |
| Alkaloid pathway | 365 | 20 | 7DLGT (82) | View species results |
| Phenylpropanoid pathway | 316 | 12 | POD (132) | View species results |
| Flavonoid pathway | 226 | 11 | UFGT (160) | View species results |
| Rosmarinic acid pathway | 164 | 7 | C4H (73) | View species results |
| Steroid pathway | 95 | 12 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1801 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 304 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Scus12G0010370.1 | Alkaloid | GES | medium | pass | GES__00003__sp_C0KWV6_GRNL7_PERFR |
| Scus12G0010380.1 | Alkaloid | GES | medium | pass | GES__00002__sp_C0KWV4_GRNLG_PERFH |
| Scus13G0000560.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| Scus13G0002420.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| Scus13G0002440.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| Scus13G0002450.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| Scus13G0002460.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| Scus13G0002470.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| Scus13G0007770.1 | Alkaloid | GES | low | borderline | GES__00010__sp_Q93YV0_GES_ARATH |
| Scus14G0017510.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| Scus16G0011250.1 | Alkaloid | GES | low | borderline | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| Scus16G0011260.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| Scus16G0011270.1 | Alkaloid | GES | medium | pass | GES__00006__sp_Q4JHG3_GRNLC_PERFH |
| Scus16G0011290.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| Scus16G0011300.1 | Alkaloid | GES | low | borderline | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| Scus16G0011940.1 | Alkaloid | GES | low | borderline | GES__00010__sp_Q93YV0_GES_ARATH |
| Scus16G0022910.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| ScusContig008020003560.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| ScusContig013510010650.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |