Strobilanthes cusia (strobilanthes_cusia)
Imported from atlas release summary for Strobilanthes cusia.
2016
Candidate Protein Records
1708
Pathway-Level Records
4427
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4427
Family-Level Calls
C4H
6.75%
C3'H/CYP98A
6.6%
BAHD
5.24%
IFS
4.34%
UGT
4.13%
T3O
4.09%
7DLGT
3.86%
UFGT
3.84%
Other Families
61.15%
More Families (97)
4CL
163
3.68%
CYP76
161
3.64%
POD
137
3.09%
F3H
117
2.64%
DWF4/CYP90B1
111
2.51%
F3'H/CYP75B
96
2.17%
BR6OX2/CYP85A2
89
2.01%
CAD
87
1.97%
TPS
76
1.72%
STR
69
1.56%
NMT
69
1.56%
GES
69
1.56%
CYP71
69
1.56%
CODM/T6ODM
68
1.54%
CAS
55
1.24%
BBE
50
1.13%
H6H
50
1.13%
TRI/TRII
48
1.08%
SMT1/SMT2/SMT3
46
1.04%
CYP90D1
42
0.95%
IFR
40
0.9%
ANR
38
0.86%
RAS
38
0.86%
7DLH
36
0.81%
LAC
35
0.79%
PYKS
34
0.77%
HCT
34
0.77%
SGD
32
0.72%
SLS
31
0.7%
PMT
31
0.7%
CSE
31
0.7%
GS
30
0.68%
CPD/CYP90A1
29
0.66%
G8O/G8H
26
0.59%
IO
26
0.59%
T16H
25
0.56%
TAT
25
0.56%
COMT
24
0.54%
NCS
23
0.52%
LAMT
22
0.5%
16OMT
21
0.47%
F3'5'H/CYP75A
21
0.47%
PAL
21
0.47%
CCR
20
0.45%
8HGO
19
0.43%
ROT3/CYP90C1
18
0.41%
CYP51G1
17
0.38%
CNMT
15
0.34%
FNS
15
0.34%
F5H/CYP84A
15
0.34%
COR
14
0.32%
GGPPS
12
0.27%
FPPS
12
0.27%
BR6OX1/CYP85A1
11
0.25%
SQE
11
0.25%
HPPR
10
0.23%
CPR
9
0.2%
AACT
9
0.2%
MPO
8
0.18%
TDC
8
0.18%
DFR
8
0.18%
ANS/LDOX
8
0.18%
CCoAOMT
8
0.18%
CYP719
7
0.16%
CHS
7
0.16%
SMO1/SMO2
7
0.16%
SQS/FDFT1
7
0.16%
DXS
7
0.16%
ISY
6
0.14%
CYP80B1
6
0.14%
DET2
6
0.14%
HMGR
5
0.11%
MVK
5
0.11%
DWF1
4
0.09%
MVD
4
0.09%
HDR/IspH
4
0.09%
TYDC_DDC
3
0.07%
ADC
3
0.07%
CHI
3
0.07%
DXR
3
0.07%
HDS/IspG
3
0.07%
ODC
2
0.05%
CPI1
2
0.05%
DWF7
2
0.05%
HYD1
2
0.05%
IDI
2
0.05%
PMK
2
0.05%
HMGS
2
0.05%
MDS/IspF
2
0.05%
CMK/IspE
2
0.05%
XMT_MXMT_DXMT
1
0.02%
CYP80F1
1
0.02%
FLS
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
MCT/IspD
1
0.02%
GPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 542 | 19 | BAHD (184) | View species results |
| Alkaloid pathway | 365 | 20 | 7DLGT (82) | View species results |
| Phenylpropanoid pathway | 316 | 12 | POD (132) | View species results |
| Flavonoid pathway | 226 | 11 | UFGT (160) | View species results |
| Rosmarinic acid pathway | 164 | 7 | C4H (73) | View species results |
| Steroid pathway | 95 | 12 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1801 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 304 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Scus03G0012590.1 | Alkaloid | H6H | low | borderline |
| Scus03G0012600.1 | Alkaloid | H6H | low | borderline |
| Scus03G0019420.1 | Alkaloid | H6H | medium | borderline |
| Scus04G0001110.1 | Alkaloid | H6H | medium | pass |
| Scus06G0000200.1 | Alkaloid | H6H | low | borderline |
| Scus06G0008230.1 | Alkaloid | H6H | low | borderline |
| Scus06G0012660.1 | Alkaloid | H6H | low | borderline |
| Scus06G0013270.1 | Alkaloid | H6H | low | borderline |
| Scus06G0013280.1 | Alkaloid | H6H | low | borderline |
| Scus06G0013300.1 | Alkaloid | H6H | low | borderline |
| Scus06G0013310.1 | Alkaloid | H6H | low | borderline |
| Scus06G0013330.1 | Alkaloid | H6H | low | borderline |
| Scus06G0019100.1 | Alkaloid | H6H | low | borderline |
| Scus06G0019930.1 | Alkaloid | H6H | low | borderline |
| Scus08G0009560.1 | Alkaloid | H6H | low | borderline |
| Scus10G0010280.1 | Alkaloid | H6H | high | pass |
| Scus11G0007690.1 | Alkaloid | H6H | medium | pass |
| Scus11G0007790.1 | Alkaloid | H6H | medium | borderline |
| Scus12G0000230.1 | Alkaloid | H6H | low | borderline |
| Scus12G0005050.1 | Alkaloid | H6H | low | borderline |
| Scus12G0005060.1 | Alkaloid | H6H | low | borderline |
| Scus12G0010220.1 | Alkaloid | H6H | low | borderline |
| Scus14G0001500.1 | Alkaloid | H6H | low | borderline |
| Scus14G0009550.1 | Alkaloid | H6H | medium | borderline |
| Scus14G0012510.1 | Alkaloid | H6H | low | borderline |
| Scus14G0017900.1 | Alkaloid | H6H | medium | borderline |
| Scus14G0019000.1 | Alkaloid | H6H | medium | borderline |
| Scus14G0019020.1 | Alkaloid | H6H | medium | borderline |
| Scus14G0019060.1 | Alkaloid | H6H | medium | borderline |
| Scus14G0019070.1 | Alkaloid | H6H | medium | borderline |
| Scus14G0019760.1 | Alkaloid | H6H | medium | borderline |
| Scus16G0011710.1 | Alkaloid | H6H | high | pass |
| Scus16G0022320.1 | Alkaloid | H6H | high | pass |
| Scus16G0025900.1 | Alkaloid | H6H | low | borderline |
| Scus16G0025910.1 | Alkaloid | H6H | low | borderline |
| ScusContig000660000410.1 | Alkaloid | H6H | low | borderline |
| Scus01G0019710.1 | Alkaloid | IO | medium | borderline |
| Scus02G0007670.1 | Alkaloid | IO | medium | borderline |
| Scus02G0007680.1 | Alkaloid | IO | medium | borderline |
| Scus02G0020660.1 | Alkaloid | IO | medium | borderline |
| Scus02G0021770.1 | Alkaloid | IO | medium | borderline |
| Scus02G0021900.1 | Alkaloid | IO | medium | pass |
| Scus04G0009200.1 | Alkaloid | IO | medium | borderline |
| Scus04G0009240.1 | Alkaloid | IO | medium | borderline |
| Scus05G0006170.1 | Alkaloid | IO | medium | borderline |
| Scus09G0000100.1 | Alkaloid | IO | medium | borderline |
| Scus12G0001570.1 | Alkaloid | IO | low | borderline |
| Scus14G0003440.1 | Alkaloid | IO | medium | borderline |
| Scus14G0009680.1 | Alkaloid | IO | medium | borderline |
| Scus15G0006140.1 | Alkaloid | IO | medium | pass |