Syzygium grande (syzygium_grande)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 31.06% Alkaloid pathway 21.45% Phenylpropanoid pathway 20.5% Flavonoid pathway 13.4% Rosmarinic acid pathway 8.33% Steroid pathway 5.26%

Family Distribution

5154 Family-Level Calls

UGT 6.15% C4H 5.68% C3'H/CYP98A 5.65% BAHD 5.14% 7DLGT 4.7% CYP76 3.92% UFGT 3.88% IFS 3.65%

Other Families 61.23%

More Families (94)

4CL 165 3.2% POD 164 3.18% F3H 143 2.77% T3O 137 2.66% DWF4/CYP90B1 136 2.64% CAD 94 1.82% F3'H/CYP75B 92 1.79% CODM/T6ODM 89 1.73% STR 84 1.63% NMT 82 1.59% BR6OX2/CYP85A2 82 1.59% H6H 81 1.57% SMT1/SMT2/SMT3 75 1.46% TPS 72 1.4% TRI/TRII 70 1.36% COMT 70 1.36% LAC 69 1.34% CAS 68 1.32% GES 64 1.24% GS 51 0.99% G8O/G8H 51 0.99% IO 50 0.97% CYP71 47 0.91% 7DLH 46 0.89% F3'5'H/CYP75A 46 0.89% T16H 44 0.85% IFR 42 0.81% BBE 41 0.8% TAT 41 0.8% CYP90D1 41 0.8% 16OMT 37 0.72% HCT 37 0.72% COR 36 0.7% RAS 36 0.7% SLS 34 0.66% PAL 33 0.64% CSE 33 0.64% PMT 32 0.62% PYKS 31 0.6% SGD 29 0.56% ANR 29 0.56% F5H/CYP84A 29 0.56% CCR 28 0.54% NCS 26 0.5% FNS 25 0.49% BR6OX1/CYP85A1 23 0.45% ROT3/CYP90C1 22 0.43% 8HGO 21 0.41% CPD/CYP90A1 21 0.41% CYP51G1 18 0.35% LAMT 16 0.31% ANS/LDOX 15 0.29% DFR 15 0.29% CHS 15 0.29% CCoAOMT 13 0.25% HPPR 11 0.21% CYP80B1 10 0.19% CYP719 10 0.19% AACT 9 0.17% SQE 7 0.14% SQS/FDFT1 7 0.14% CNMT 6 0.12% CPI1 6 0.12% HMGR 6 0.12% GGPPS 6 0.12% 6OMT_4OMT_SOMT 5 0.1% TDC 5 0.1% CHI 5 0.1% FPPS 5 0.1% MVD 5 0.1% MVK 5 0.1% DXS 5 0.1% IDI 5 0.1% XMT_MXMT_DXMT 4 0.08% CPR 4 0.08% DET2 4 0.08% TYDC_DDC 3 0.06% ISY 3 0.06% FLS 3 0.06% FK 3 0.06% MPO 2 0.04% HYD1 2 0.04% SMO1/SMO2 2 0.04% DXR 2 0.04% PMK 2 0.04% MDS/IspF 2 0.04% HMGS 2 0.04% HDR/IspH 2 0.04% HDS/IspG 2 0.04% ODC 1 0.02% DWF7 1 0.02% DWF1 1 0.02% DWF5 1 0.02% MCT/IspD 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	656	18	UGT (275)	View species results
Alkaloid pathway	453	25	7DLGT (88)	View species results
Phenylpropanoid pathway	433	12	POD (147)	View species results
Flavonoid pathway	283	15	UFGT (171)	View species results
Rosmarinic acid pathway	176	7	C4H (65)	View species results
Steroid pathway	111	14	CAS (47)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	23	1913	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	338	BAHD, HCT, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: 4CL

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
syzygium_grande_EVM%20prediction%20Scaffold_6__1_contigs__length_43109846.4353.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
syzygium_grande_EVM%20prediction%20Scaffold_6__1_contigs__length_43109846.4355.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
syzygium_grande_EVM%20prediction%20Scaffold_6__1_contigs__length_43109846.4356.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
syzygium_grande_EVM%20prediction%20Scaffold_6__1_contigs__length_43109846.4358.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
syzygium_grande_EVM%20prediction%20Scaffold_7__2_contigs__length_41423945.2503.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
syzygium_grande_EVM%20prediction%20Scaffold_7__2_contigs__length_41423945.3980.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00013__sp_Q84P23_4CLL9_ARATH
syzygium_grande_EVM%20prediction%20Scaffold_7__2_contigs__length_41423945.4012.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
syzygium_grande_EVM%20prediction%20Scaffold_7__2_contigs__length_41423945.50.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00013__sp_Q84P23_4CLL9_ARATH
syzygium_grande_EVM%20prediction%20Scaffold_7__2_contigs__length_41423945.51.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00013__sp_Q84P23_4CLL9_ARATH
syzygium_grande_EVM%20prediction%20Scaffold_8__1_contigs__length_39560355.1608.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
syzygium_grande_EVM%20prediction%20Scaffold_8__1_contigs__length_39560355.1622.mRNA1	Rosmarinic Acid	4CL	low	borderline	4CL__00003__sp_M4ISH0_CCL1_HUMLU
syzygium_grande_EVM%20prediction%20Scaffold_8__1_contigs__length_39560355.1636.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
syzygium_grande_EVM%20prediction%20Scaffold_9__1_contigs__length_35655371.1629.mRNA1	Rosmarinic Acid	4CL	low	borderline	4CL__00005__sp_P0C5B6_4CLL4_ARATH
syzygium_grande_EVM%20prediction%20Scaffold_9__1_contigs__length_35655371.2012.mRNA1	Rosmarinic Acid	4CL	low	borderline	4CL__00007__sp_Q42524_4CL1_ARATH
syzygium_grande_EVM%20prediction%20Scaffold_9__1_contigs__length_35655371.762.mRNA1	Rosmarinic Acid	4CL	medium	pass	4CL__00012__sp_Q84P21_4CLL5_ARATH