Syzygium grande (syzygium_grande)
/
Imported from atlas release summary for Syzygium grande.
2112
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2112
Candidate Genes
UGT
6.15%
C4H
5.68%
C3'H/CYP98A
5.65%
BAHD
5.14%
7DLGT
4.7%
CYP76
3.92%
UFGT
3.88%
IFS
3.65%
Other Families
61.23%
More Families (94)
4CL
165
3.2%
POD
164
3.18%
F3H
143
2.77%
T3O
137
2.66%
DWF4/CYP90B1
136
2.64%
CAD
94
1.82%
F3'H/CYP75B
92
1.79%
CODM/T6ODM
89
1.73%
STR
84
1.63%
NMT
82
1.59%
BR6OX2/CYP85A2
82
1.59%
H6H
81
1.57%
SMT1/SMT2/SMT3
75
1.46%
TPS
72
1.4%
TRI/TRII
70
1.36%
COMT
70
1.36%
LAC
69
1.34%
CAS
68
1.32%
GES
64
1.24%
GS
51
0.99%
G8O/G8H
51
0.99%
IO
50
0.97%
CYP71
47
0.91%
7DLH
46
0.89%
F3'5'H/CYP75A
46
0.89%
T16H
44
0.85%
IFR
42
0.81%
BBE
41
0.8%
TAT
41
0.8%
CYP90D1
41
0.8%
16OMT
37
0.72%
HCT
37
0.72%
COR
36
0.7%
RAS
36
0.7%
SLS
34
0.66%
PAL
33
0.64%
CSE
33
0.64%
PMT
32
0.62%
PYKS
31
0.6%
SGD
29
0.56%
ANR
29
0.56%
F5H/CYP84A
29
0.56%
CCR
28
0.54%
NCS
26
0.5%
FNS
25
0.49%
BR6OX1/CYP85A1
23
0.45%
ROT3/CYP90C1
22
0.43%
8HGO
21
0.41%
CPD/CYP90A1
21
0.41%
CYP51G1
18
0.35%
LAMT
16
0.31%
ANS/LDOX
15
0.29%
DFR
15
0.29%
CHS
15
0.29%
CCoAOMT
13
0.25%
HPPR
11
0.21%
CYP80B1
10
0.19%
CYP719
10
0.19%
AACT
9
0.17%
SQE
7
0.14%
SQS/FDFT1
7
0.14%
CNMT
6
0.12%
CPI1
6
0.12%
HMGR
6
0.12%
GGPPS
6
0.12%
6OMT_4OMT_SOMT
5
0.1%
TDC
5
0.1%
CHI
5
0.1%
FPPS
5
0.1%
MVD
5
0.1%
MVK
5
0.1%
DXS
5
0.1%
IDI
5
0.1%
XMT_MXMT_DXMT
4
0.08%
CPR
4
0.08%
DET2
4
0.08%
TYDC_DDC
3
0.06%
ISY
3
0.06%
FLS
3
0.06%
FK
3
0.06%
MPO
2
0.04%
HYD1
2
0.04%
SMO1/SMO2
2
0.04%
DXR
2
0.04%
PMK
2
0.04%
MDS/IspF
2
0.04%
HMGS
2
0.04%
HDR/IspH
2
0.04%
HDS/IspG
2
0.04%
ODC
1
0.02%
DWF7
1
0.02%
DWF1
1
0.02%
DWF5
1
0.02%
MCT/IspD
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 656 | 18 | UGT (275) | View species results |
| Alkaloid pathway | 453 | 25 | 7DLGT (88) | View species results |
| Phenylpropanoid pathway | 433 | 12 | POD (147) | View species results |
| Flavonoid pathway | 283 | 15 | UFGT (171) | View species results |
| Rosmarinic acid pathway | 176 | 7 | C4H (65) | View species results |
| Steroid pathway | 111 | 14 | CAS (47) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1913 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 338 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.341.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.582.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.109.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.1826.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.1830.mRNA1 | Phenylpropanoid | POD | low | borderline | POD__00020__sp_Q9FE01_APX2_ORYSJ |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.1927.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.1928.mRNA1 | Phenylpropanoid | POD | low | borderline | POD__00019__sp_Q949Y3_PPA26_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.1929.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.1930.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.1931.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.2047.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.2422.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.2458.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.749.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1645.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1785.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1786.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1788.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1790.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.184.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2072.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2121.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00020__sp_Q9FE01_APX2_ORYSJ |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2521.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2522.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2524.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2530.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2531.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2533.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2534.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2535.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2536.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2537.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2538.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.3080.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.3134.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.593.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.595.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.596.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.922.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.1199.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.1349.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.1446.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2512.mRNA1 | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2513.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2535.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2593.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2753.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2839.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2844.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2845.mRNA1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |