Syzygium grande (syzygium_grande)
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Imported from atlas release summary for Syzygium grande.
2112
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2112
Candidate Genes
UGT
6.15%
C4H
5.68%
C3'H/CYP98A
5.65%
BAHD
5.14%
7DLGT
4.7%
CYP76
3.92%
UFGT
3.88%
IFS
3.65%
Other Families
61.23%
More Families (94)
4CL
165
3.2%
POD
164
3.18%
F3H
143
2.77%
T3O
137
2.66%
DWF4/CYP90B1
136
2.64%
CAD
94
1.82%
F3'H/CYP75B
92
1.79%
CODM/T6ODM
89
1.73%
STR
84
1.63%
NMT
82
1.59%
BR6OX2/CYP85A2
82
1.59%
H6H
81
1.57%
SMT1/SMT2/SMT3
75
1.46%
TPS
72
1.4%
TRI/TRII
70
1.36%
COMT
70
1.36%
LAC
69
1.34%
CAS
68
1.32%
GES
64
1.24%
GS
51
0.99%
G8O/G8H
51
0.99%
IO
50
0.97%
CYP71
47
0.91%
7DLH
46
0.89%
F3'5'H/CYP75A
46
0.89%
T16H
44
0.85%
IFR
42
0.81%
BBE
41
0.8%
TAT
41
0.8%
CYP90D1
41
0.8%
16OMT
37
0.72%
HCT
37
0.72%
COR
36
0.7%
RAS
36
0.7%
SLS
34
0.66%
PAL
33
0.64%
CSE
33
0.64%
PMT
32
0.62%
PYKS
31
0.6%
SGD
29
0.56%
ANR
29
0.56%
F5H/CYP84A
29
0.56%
CCR
28
0.54%
NCS
26
0.5%
FNS
25
0.49%
BR6OX1/CYP85A1
23
0.45%
ROT3/CYP90C1
22
0.43%
8HGO
21
0.41%
CPD/CYP90A1
21
0.41%
CYP51G1
18
0.35%
LAMT
16
0.31%
ANS/LDOX
15
0.29%
DFR
15
0.29%
CHS
15
0.29%
CCoAOMT
13
0.25%
HPPR
11
0.21%
CYP80B1
10
0.19%
CYP719
10
0.19%
AACT
9
0.17%
SQE
7
0.14%
SQS/FDFT1
7
0.14%
CNMT
6
0.12%
CPI1
6
0.12%
HMGR
6
0.12%
GGPPS
6
0.12%
6OMT_4OMT_SOMT
5
0.1%
TDC
5
0.1%
CHI
5
0.1%
FPPS
5
0.1%
MVD
5
0.1%
MVK
5
0.1%
DXS
5
0.1%
IDI
5
0.1%
XMT_MXMT_DXMT
4
0.08%
CPR
4
0.08%
DET2
4
0.08%
TYDC_DDC
3
0.06%
ISY
3
0.06%
FLS
3
0.06%
FK
3
0.06%
MPO
2
0.04%
HYD1
2
0.04%
SMO1/SMO2
2
0.04%
DXR
2
0.04%
PMK
2
0.04%
MDS/IspF
2
0.04%
HMGS
2
0.04%
HDR/IspH
2
0.04%
HDS/IspG
2
0.04%
ODC
1
0.02%
DWF7
1
0.02%
DWF1
1
0.02%
DWF5
1
0.02%
MCT/IspD
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 656 | 18 | UGT (275) | View species results |
| Alkaloid pathway | 453 | 25 | 7DLGT (88) | View species results |
| Phenylpropanoid pathway | 433 | 12 | POD (147) | View species results |
| Flavonoid pathway | 283 | 15 | UFGT (171) | View species results |
| Rosmarinic acid pathway | 176 | 7 | C4H (65) | View species results |
| Steroid pathway | 111 | 14 | CAS (47) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1913 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 338 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.2263.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.2265.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.2267.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.2268.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.2300.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.396.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1101.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1556.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1570.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1571.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1572.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00028__sp_O80467_SDT_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1581.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00084__sp_Q9M115_ZDH16_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1718.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2235.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00063__sp_Q93VV0_ZDHC6_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2348.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2378.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2713.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.2769.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00041__sp_Q4VCM1_LCAT2_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.568.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.664.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.862.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.863.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.865.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.866.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.867.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.869.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.870.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.873.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00033__sp_P0DXG0_AT_STRYX |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.1140.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00018__sp_I1MRZ6_DAT32_SOYBN |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.1185.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.1320.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2033.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00061__sp_Q8VYS8_ZDH24_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2248.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00066__sp_Q94CK0_WSD7_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2255.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00066__sp_Q94CK0_WSD7_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2257.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00066__sp_Q94CK0_WSD7_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2258.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00066__sp_Q94CK0_WSD7_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.256.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2690.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2692.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.2693.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.3027.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.3818.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.3819.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.3823.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.4187.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00024__sp_O23393_BIA1_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.4188.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF |
| syzygium_grande_EVM%20prediction%20Scaffold_5__1_contigs__length_43366330.580.mRNA1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_6__1_contigs__length_43109846.1060.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_6__1_contigs__length_43109846.1061.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| syzygium_grande_EVM%20prediction%20Scaffold_6__1_contigs__length_43109846.1065.mRNA1 | Terpenoid | BAHD | low | borderline | BAHD__00001__sp_A0A068BGA5_AT1_ACTDE |