Syzygium grande (syzygium_grande)
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Imported from atlas release summary for Syzygium grande.
2112
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2112
Candidate Genes
UGT
6.15%
C4H
5.68%
C3'H/CYP98A
5.65%
BAHD
5.14%
7DLGT
4.7%
CYP76
3.92%
UFGT
3.88%
IFS
3.65%
Other Families
61.23%
More Families (94)
4CL
165
3.2%
POD
164
3.18%
F3H
143
2.77%
T3O
137
2.66%
DWF4/CYP90B1
136
2.64%
CAD
94
1.82%
F3'H/CYP75B
92
1.79%
CODM/T6ODM
89
1.73%
STR
84
1.63%
NMT
82
1.59%
BR6OX2/CYP85A2
82
1.59%
H6H
81
1.57%
SMT1/SMT2/SMT3
75
1.46%
TPS
72
1.4%
TRI/TRII
70
1.36%
COMT
70
1.36%
LAC
69
1.34%
CAS
68
1.32%
GES
64
1.24%
GS
51
0.99%
G8O/G8H
51
0.99%
IO
50
0.97%
CYP71
47
0.91%
7DLH
46
0.89%
F3'5'H/CYP75A
46
0.89%
T16H
44
0.85%
IFR
42
0.81%
BBE
41
0.8%
TAT
41
0.8%
CYP90D1
41
0.8%
16OMT
37
0.72%
HCT
37
0.72%
COR
36
0.7%
RAS
36
0.7%
SLS
34
0.66%
PAL
33
0.64%
CSE
33
0.64%
PMT
32
0.62%
PYKS
31
0.6%
SGD
29
0.56%
ANR
29
0.56%
F5H/CYP84A
29
0.56%
CCR
28
0.54%
NCS
26
0.5%
FNS
25
0.49%
BR6OX1/CYP85A1
23
0.45%
ROT3/CYP90C1
22
0.43%
8HGO
21
0.41%
CPD/CYP90A1
21
0.41%
CYP51G1
18
0.35%
LAMT
16
0.31%
ANS/LDOX
15
0.29%
DFR
15
0.29%
CHS
15
0.29%
CCoAOMT
13
0.25%
HPPR
11
0.21%
CYP80B1
10
0.19%
CYP719
10
0.19%
AACT
9
0.17%
SQE
7
0.14%
SQS/FDFT1
7
0.14%
CNMT
6
0.12%
CPI1
6
0.12%
HMGR
6
0.12%
GGPPS
6
0.12%
6OMT_4OMT_SOMT
5
0.1%
TDC
5
0.1%
CHI
5
0.1%
FPPS
5
0.1%
MVD
5
0.1%
MVK
5
0.1%
DXS
5
0.1%
IDI
5
0.1%
XMT_MXMT_DXMT
4
0.08%
CPR
4
0.08%
DET2
4
0.08%
TYDC_DDC
3
0.06%
ISY
3
0.06%
FLS
3
0.06%
FK
3
0.06%
MPO
2
0.04%
HYD1
2
0.04%
SMO1/SMO2
2
0.04%
DXR
2
0.04%
PMK
2
0.04%
MDS/IspF
2
0.04%
HMGS
2
0.04%
HDR/IspH
2
0.04%
HDS/IspG
2
0.04%
ODC
1
0.02%
DWF7
1
0.02%
DWF1
1
0.02%
DWF5
1
0.02%
MCT/IspD
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 656 | 18 | UGT (275) | View species results |
| Alkaloid pathway | 453 | 25 | 7DLGT (88) | View species results |
| Phenylpropanoid pathway | 433 | 12 | POD (147) | View species results |
| Flavonoid pathway | 283 | 15 | UFGT (171) | View species results |
| Rosmarinic acid pathway | 176 | 7 | C4H (65) | View species results |
| Steroid pathway | 111 | 14 | CAS (47) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1913 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 338 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| syzygium_grande_EVM%20prediction%20Scaffold_11__1_contigs__length_28611674.400.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT |
| syzygium_grande_EVM%20prediction%20Scaffold_11__1_contigs__length_28611674.763.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.1406.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.1407.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.1637.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.1756.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.1757.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2393.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2453.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2454.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2455.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2786.mRNA1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2936.mRNA1 | Terpenoid | CYP76 | low | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2993.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2994.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2995.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2996.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2997.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.3475.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.464.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.466.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.586.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.588.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.589.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.591.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.1081.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.1321.mRNA1 | Terpenoid | CYP76 | low | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.157.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.17.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.2238.mRNA1 | Terpenoid | CYP76 | low | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.2240.mRNA1 | Terpenoid | CYP76 | low | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.389.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.443.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.444.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.447.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.450.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.451.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.452.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.454.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.455.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00007__sp_A0A1D8QMD2_C76K7_ROSOF |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.456.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.457.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.458.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.459.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| syzygium_grande_EVM%20prediction%20Scaffold_2__1_contigs__length_27788763.686.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.1534.mRNA1 | Terpenoid | CYP76 | low | borderline | CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.1916.mRNA1 | Terpenoid | CYP76 | medium | pass | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.2022.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.438.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| syzygium_grande_EVM%20prediction%20Scaffold_3__1_contigs__length_23649235.439.mRNA1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |