PlantSME Plant secondary metabolism enzyme database

Thinopyrum elongatum (thinopyrum_elongatum)

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Imported from atlas release summary for Thinopyrum elongatum.

2690
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.1% Phenylpropanoid pathway 22.79% Alkaloid pathway 22.19% Flavonoid pathway 14.91% Rosmarinic acid pathway 9.03% Steroid pathway 4.98%
Family Distribution
C4H 6.93% C3'H/CYP98A 6.72% POD 5.21% UGT 4.86% BAHD 4.85% 7DLGT 4.4% UFGT 4.14% T3O 3.85%
Other Families 59.04%
More Families (97)
CYP76 250 3.83% IFS 240 3.68% F3'H/CYP75B 180 2.76% 4CL 165 2.53% DWF4/CYP90B1 155 2.38% BR6OX2/CYP85A2 144 2.21% F3H 139 2.13% CYP71 110 1.69% STR 103 1.58% NMT 96 1.47% PYKS 93 1.43% SMT1/SMT2/SMT3 87 1.33% CSE 79 1.21% H6H 74 1.13% CODM/T6ODM 73 1.12% SLS 72 1.1% G8O/G8H 72 1.1% CAD 72 1.1% CAS 64 0.98% TRI/TRII 62 0.95% LAC 62 0.95% COMT 57 0.87% CHS 52 0.8% CYP90D1 52 0.8% SGD 51 0.78% RAS 51 0.78% CYP51G1 51 0.78% T16H 50 0.77% PAL 48 0.74% TPS 48 0.74% PMT 47 0.72% GES 46 0.71% ANR 43 0.66% HCT 42 0.64% 16OMT 40 0.61% CCR 40 0.61% IFR 38 0.58% GS 36 0.55% F3'5'H/CYP75A 33 0.51% IO 32 0.49% CPD/CYP90A1 32 0.49% BBE 31 0.48% FNS 31 0.48% 8HGO 30 0.46% F5H/CYP84A 30 0.46% NCS 28 0.43% HPPR 27 0.41% TYDC_DDC 25 0.38% ANS/LDOX 22 0.34% 7DLH 21 0.32% BR6OX1/CYP85A1 21 0.32% COR 19 0.29% DFR 19 0.29% CNMT 16 0.25% TAT 16 0.25% CYP719 14 0.21% 6OMT_4OMT_SOMT 13 0.2% TDC 12 0.18% LAMT 12 0.18% ROT3/CYP90C1 12 0.18% XMT_MXMT_DXMT 11 0.17% AACT 11 0.17% FPPS 11 0.17% CYP80B1 10 0.15% CPR 9 0.14% SMO1/SMO2 8 0.12% GGPPS 8 0.12% ISY 7 0.11% DXR 7 0.11% CCoAOMT 6 0.09% DWF1 6 0.09% SQE 6 0.09% MVK 6 0.09% CYP80F1 5 0.08% MPO 5 0.08% SQS/FDFT1 5 0.08% ODC 4 0.06% DET2 4 0.06% HYD1 4 0.06% DXS 4 0.06% MVD 4 0.06% CHI 3 0.05% CPI1 3 0.05% MCT/IspD 3 0.05% HMGS 3 0.05% HMGR 3 0.05% ADC 2 0.03% IDI 2 0.03% PMK 2 0.03% FK 1 0.02% DWF7 1 0.02% DWF5 1 0.02% CMK/IspE 1 0.02% HDR/IspH 1 0.02% GPPS 1 0.02% HDS/IspG 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 702 20 UGT (304) View species results
Phenylpropanoid pathway 613 12 POD (317) View species results
Alkaloid pathway 597 26 7DLGT (138) View species results
Flavonoid pathway 401 14 UFGT (256) View species results
Rosmarinic acid pathway 243 7 C4H (123) View species results
Steroid pathway 134 15 SMT1/SMT2/SMT3 (54) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2727 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 409 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
thinopyrum_elongatum_GWHPABKY037016 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
thinopyrum_elongatum_GWHPABKY037041 Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
thinopyrum_elongatum_GWHPABKY038275 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
thinopyrum_elongatum_GWHPABKY038278 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
thinopyrum_elongatum_GWHPABKY038280 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
thinopyrum_elongatum_GWHPABKY038595 Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
thinopyrum_elongatum_GWHPABKY039808 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
thinopyrum_elongatum_GWHPABKY041376 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
thinopyrum_elongatum_GWHPABKY041377 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
thinopyrum_elongatum_GWHPABKY043751 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
thinopyrum_elongatum_GWHPABKY043754 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
thinopyrum_elongatum_GWHPABKY043767 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
thinopyrum_elongatum_GWHPABKY044417 Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
thinopyrum_elongatum_GWHPABKY044418 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ