PlantSME Plant secondary metabolism enzyme database

Trapa bicornis (trapa_bicornis)

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Imported from atlas release summary for Trapa bicornis.

1255
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 350 19 BAHD (139) View species results
Phenylpropanoid pathway 290 11 POD (118) View species results
Alkaloid pathway 261 19 NMT (57) View species results
Flavonoid pathway 153 7 UFGT (84) View species results
Rosmarinic acid pathway 109 7 C4H (38) View species results
Steroid pathway 92 13 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 985 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
trapa_bicornis_GWHPBOVS025084 Phenylpropanoid C4H/CYP73A low borderline
trapa_bicornis_GWHPBOVS001205 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS002170 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS003735 Phenylpropanoid CAD medium borderline
trapa_bicornis_GWHPBOVS005757 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS005804 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS006152 Phenylpropanoid CAD medium borderline
trapa_bicornis_GWHPBOVS007179 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS009271 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS010231 Phenylpropanoid CAD medium borderline
trapa_bicornis_GWHPBOVS010463 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS016082 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS016526 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS017112 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS017593 Phenylpropanoid CAD medium borderline
trapa_bicornis_GWHPBOVS019338 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS019691 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS019793 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS020000 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS020022 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS020023 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS020026 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS020035 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS020649 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS021029 Phenylpropanoid CAD medium borderline
trapa_bicornis_GWHPBOVS021077 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS021949 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS022253 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS022254 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS022255 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS022855 Phenylpropanoid CAD medium borderline
trapa_bicornis_GWHPBOVS023139 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS023141 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS023143 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS023144 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS023145 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS023146 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS024732 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS025036 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS027019 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS027888 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS029356 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS029617 Phenylpropanoid CAD low borderline
trapa_bicornis_GWHPBOVS029619 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS032053 Phenylpropanoid CAD medium pass
trapa_bicornis_GWHPBOVS002284 Phenylpropanoid CCR medium borderline
trapa_bicornis_GWHPBOVS002862 Phenylpropanoid CCR medium borderline
trapa_bicornis_GWHPBOVS003894 Phenylpropanoid CCR medium borderline
trapa_bicornis_GWHPBOVS003895 Phenylpropanoid CCR medium borderline
trapa_bicornis_GWHPBOVS004052 Phenylpropanoid CCR medium borderline