PlantSME Plant secondary metabolism enzyme database

Triticum monococcum (triticum_monococcum)

Imported from atlas release summary for Triticum monococcum.

2785
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.32% Phenylpropanoid pathway 22.37% Alkaloid pathway 21.76% Flavonoid pathway 15.8% Rosmarinic acid pathway 8.9% Steroid pathway 4.85%
Family Distribution
C4H 6.68% C3'H/CYP98A 6.62% BAHD 4.85% UGT 4.47% POD 4.44% 7DLGT 4.23% T3O 4.22% UFGT 4.15%
Other Families 60.34%
More Families (97)
IFS 260 3.66% CYP76 258 3.63% F3'H/CYP75B 187 2.63% 4CL 180 2.53% BR6OX2/CYP85A2 172 2.42% F3H 167 2.35% DWF4/CYP90B1 163 2.29% CYP71 134 1.88% NMT 108 1.52% CSE 104 1.46% PYKS 97 1.36% SMT1/SMT2/SMT3 96 1.35% STR 95 1.34% CAS 90 1.27% TPS 88 1.24% CAD 87 1.22% H6H 86 1.21% GES 79 1.11% CODM/T6ODM 79 1.11% PAL 72 1.01% COMT 72 1.01% CCR 66 0.93% RAS 64 0.9% CYP90D1 62 0.87% PMT 60 0.84% SLS 60 0.84% G8O/G8H 59 0.83% HCT 58 0.82% ANR 54 0.76% TRI/TRII 53 0.75% SGD 53 0.75% 16OMT 52 0.73% CHS 52 0.73% FNS 52 0.73% T16H 51 0.72% CYP51G1 49 0.69% LAC 46 0.65% BBE 45 0.63% NCS 40 0.56% IFR 40 0.56% DFR 39 0.55% F3'5'H/CYP75A 34 0.48% GS 33 0.46% IO 30 0.42% F5H/CYP84A 30 0.42% TYDC_DDC 27 0.38% COR 23 0.32% CPD/CYP90A1 23 0.32% 8HGO 19 0.27% CYP719 19 0.27% BR6OX1/CYP85A1 19 0.27% ANS/LDOX 17 0.24% CNMT 14 0.2% CPR 14 0.2% HPPR 14 0.2% LAMT 13 0.18% 7DLH 12 0.17% TDC 12 0.17% 6OMT_4OMT_SOMT 11 0.15% TAT 11 0.15% ROT3/CYP90C1 11 0.15% AACT 11 0.15% FPPS 11 0.15% CYP80B1 10 0.14% FLS 10 0.14% CYP80F1 9 0.13% XMT_MXMT_DXMT 8 0.11% SQS/FDFT1 8 0.11% MVK 8 0.11% GGPPS 8 0.11% ISY 7 0.1% CCoAOMT 6 0.08% HMGR 6 0.08% ADC 5 0.07% ODC 5 0.07% SMO1/SMO2 5 0.07% MVD 5 0.07% IDI 5 0.07% MPO 4 0.06% DWF1 4 0.06% HYD1 4 0.06% CPI1 4 0.06% DXS 4 0.06% HMGS 4 0.06% DET2 3 0.04% SQE 3 0.04% PMK 3 0.04% CHI 2 0.03% DWF7 2 0.03% HDS/IspG 2 0.03% MCT/IspD 2 0.03% DXR 2 0.03% CMK/IspE 2 0.03% HDR/IspH 2 0.03% FK 1 0.01% DWF5 1 0.01% MDS/IspF 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 733 19 UGT (298) View species results
Phenylpropanoid pathway 623 12 POD (295) View species results
Alkaloid pathway 606 21 7DLGT (152) View species results
Flavonoid pathway 440 11 UFGT (279) View species results
Rosmarinic acid pathway 248 7 C4H (123) View species results
Steroid pathway 135 14 SMT1/SMT2/SMT3 (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 467 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
triticum_monococcum_Tm.TA10622.r1.7AG0045280.1 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
triticum_monococcum_Tm.TA10622.r1.7AG0058700LC.1 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
triticum_monococcum_Tm.TA10622.r1.7AG0082340.1 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
triticum_monococcum_Tm.TA10622.r1.7AG0091320.1 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
triticum_monococcum_Tm.TA10622.r1.7AG0116080LC.1 Alkaloid NMT low borderline NMT__00036__sp_Q6K9X3_NAMT1_ORYSJ
triticum_monococcum_Tm.TA10622.r1.7AG0149400.1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
triticum_monococcum_Tm.TA10622.r1.7AG0171390.1 Alkaloid NMT medium pass NMT__00036__sp_Q6K9X3_NAMT1_ORYSJ
triticum_monococcum_Tm.TA10622.r1.7AG0179920.1 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI