Typha latifolia (typha_latifolia)
Imported from atlas release summary for Typha latifolia.
1046
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1046
Candidate Genes
C4H
7.49%
BAHD
6.72%
POD
6.45%
C3'H/CYP98A
4.41%
4CL
4.38%
CYP76
3.3%
UGT
2.76%
F3H
2.65%
Other Families
61.84%
More Families (96)
F3'H/CYP75B
65
2.5%
IFS
62
2.38%
NMT
61
2.34%
STR
57
2.19%
T3O
55
2.11%
SMT1/SMT2/SMT3
55
2.11%
7DLGT
52
2.0%
UFGT
46
1.77%
DWF4/CYP90B1
46
1.77%
CSE
45
1.73%
LAC
42
1.61%
G8O/G8H
40
1.54%
PYKS
38
1.46%
CODM/T6ODM
37
1.42%
H6H
35
1.34%
BR6OX2/CYP85A2
35
1.34%
CAD
34
1.31%
T16H
33
1.27%
IFR
33
1.27%
TRI/TRII
32
1.23%
FNS
28
1.07%
CYP71
27
1.04%
SGD
26
1.0%
PMT
25
0.96%
CAS
25
0.96%
RAS
24
0.92%
CHS
23
0.88%
ANR
23
0.88%
TPS
23
0.88%
GES
22
0.84%
GS
21
0.81%
PAL
21
0.81%
SLS
18
0.69%
HCT
18
0.69%
COMT
18
0.69%
CYP90D1
18
0.69%
CCR
17
0.65%
CNMT
15
0.58%
BBE
14
0.54%
NCS
13
0.5%
BR6OX1/CYP85A1
13
0.5%
COR
12
0.46%
LAMT
12
0.46%
F5H/CYP84A
12
0.46%
DFR
11
0.42%
IO
10
0.38%
16OMT
10
0.38%
F3'5'H/CYP75A
10
0.38%
SQS/FDFT1
10
0.38%
AACT
10
0.38%
7DLH
9
0.35%
8HGO
9
0.35%
CYP719
8
0.31%
CPD/CYP90A1
8
0.31%
GGPPS
8
0.31%
ADC
7
0.27%
ANS/LDOX
7
0.27%
MPO
6
0.23%
TAT
6
0.23%
ROT3/CYP90C1
6
0.23%
DWF1
6
0.23%
CYP80B1
5
0.19%
CHI
5
0.19%
CPR
5
0.19%
DWF5
5
0.19%
SMO1/SMO2
5
0.19%
IDI
5
0.19%
TDC
4
0.15%
6OMT_4OMT_SOMT
4
0.15%
CCoAOMT
4
0.15%
MVK
4
0.15%
FLS
3
0.12%
HPPR
3
0.12%
DET2
3
0.12%
DWF7
3
0.12%
CYP51G1
3
0.12%
DXS
3
0.12%
MDS/IspF
3
0.12%
MVD
3
0.12%
HMGR
3
0.12%
FPPS
3
0.12%
TYDC_DDC
2
0.08%
ISY
2
0.08%
HYD1
2
0.08%
FK
2
0.08%
MCT/IspD
2
0.08%
PMK
2
0.08%
HMGS
2
0.08%
HDR/IspH
2
0.08%
ODC
1
0.04%
XMT_MXMT_DXMT
1
0.04%
SQE
1
0.04%
CPI1
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
CMK/IspE
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 283 | 12 | POD (147) | View species results |
| Terpenoid pathway | 282 | 20 | BAHD (131) | View species results |
| Alkaloid pathway | 245 | 22 | T3O (34) | View species results |
| Flavonoid pathway | 105 | 10 | UFGT (34) | View species results |
| Steroid pathway | 80 | 11 | SMT1/SMT2/SMT3 (33) | View species results |
| Rosmarinic acid pathway | 51 | 7 | 4CL (24) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 879 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 217 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| typha_latifolia_tl.00g170760.m01.polypeptide | Phenylpropanoid | POD | low | borderline | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g176330.m01.polypeptide | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| typha_latifolia_tl.00g176600.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| typha_latifolia_tl.00g178790.m01.polypeptide | Phenylpropanoid | POD | low | borderline | POD__00002__sp_A5H8G4_PER1_MAIZE |
| typha_latifolia_tl.00g178800.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| typha_latifolia_tl.00g178880.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| typha_latifolia_tl.00g183290.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| typha_latifolia_tl.00g183300.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| typha_latifolia_tl.00g183310.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| typha_latifolia_tl.00g183320.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| typha_latifolia_tl.00g183330.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| typha_latifolia_tl.00g183370.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g183380.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g183420.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g183430.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g185090.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| typha_latifolia_tl.00g185360.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00018__sp_Q8H0V5_OCP3_ARATH |
| typha_latifolia_tl.00g185670.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| typha_latifolia_tl.00g186900.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| typha_latifolia_tl.00g188090.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| typha_latifolia_tl.00g188980.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| typha_latifolia_tl.00g191910.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g196600.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| typha_latifolia_tl.00g202810.m01.polypeptide | Phenylpropanoid | POD | low | borderline | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g207260.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g207380.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| typha_latifolia_tl.00g208030.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g209850.m01.polypeptide | Phenylpropanoid | POD | low | borderline | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g211960.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g211970.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g211980.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g211990.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g212000.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g212010.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g212020.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g214450.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g214500.m01.polypeptide | Phenylpropanoid | POD | low | borderline | POD__00002__sp_A5H8G4_PER1_MAIZE |
| typha_latifolia_tl.00g221460.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g221470.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g221480.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g221490.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g222530.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g225900.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| typha_latifolia_tl.00g226150.m01.polypeptide | Phenylpropanoid | POD | low | borderline | POD__00002__sp_A5H8G4_PER1_MAIZE |
| typha_latifolia_tl.00g226160.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| typha_latifolia_tl.00g227500.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| typha_latifolia_tl.00g230610.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g230970.m01.polypeptide | Phenylpropanoid | POD | low | borderline | POD__00019__sp_Q949Y3_PPA26_ARATH |
| typha_latifolia_tl.00g231530.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| typha_latifolia_tl.00g233580.m01.polypeptide | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |