Typha latifolia (typha_latifolia)
Imported from atlas release summary for Typha latifolia.
1434
Candidate Protein Records
1046
Pathway-Level Records
2605
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2605
Family-Level Calls
C4H
7.49%
BAHD
6.72%
POD
6.45%
C3'H/CYP98A
4.41%
4CL
4.38%
CYP76
3.3%
UGT
2.76%
F3H
2.65%
Other Families
61.84%
More Families (96)
F3'H/CYP75B
65
2.5%
IFS
62
2.38%
NMT
61
2.34%
STR
57
2.19%
T3O
55
2.11%
SMT1/SMT2/SMT3
55
2.11%
7DLGT
52
2.0%
UFGT
46
1.77%
DWF4/CYP90B1
46
1.77%
CSE
45
1.73%
LAC
42
1.61%
G8O/G8H
40
1.54%
PYKS
38
1.46%
CODM/T6ODM
37
1.42%
H6H
35
1.34%
BR6OX2/CYP85A2
35
1.34%
CAD
34
1.31%
T16H
33
1.27%
IFR
33
1.27%
TRI/TRII
32
1.23%
FNS
28
1.07%
CYP71
27
1.04%
SGD
26
1.0%
PMT
25
0.96%
CAS
25
0.96%
RAS
24
0.92%
CHS
23
0.88%
ANR
23
0.88%
TPS
23
0.88%
GES
22
0.84%
GS
21
0.81%
PAL
21
0.81%
SLS
18
0.69%
HCT
18
0.69%
COMT
18
0.69%
CYP90D1
18
0.69%
CCR
17
0.65%
CNMT
15
0.58%
BBE
14
0.54%
NCS
13
0.5%
BR6OX1/CYP85A1
13
0.5%
COR
12
0.46%
LAMT
12
0.46%
F5H/CYP84A
12
0.46%
DFR
11
0.42%
IO
10
0.38%
16OMT
10
0.38%
F3'5'H/CYP75A
10
0.38%
SQS/FDFT1
10
0.38%
AACT
10
0.38%
7DLH
9
0.35%
8HGO
9
0.35%
CYP719
8
0.31%
CPD/CYP90A1
8
0.31%
GGPPS
8
0.31%
ADC
7
0.27%
ANS/LDOX
7
0.27%
MPO
6
0.23%
TAT
6
0.23%
ROT3/CYP90C1
6
0.23%
DWF1
6
0.23%
CYP80B1
5
0.19%
CHI
5
0.19%
CPR
5
0.19%
DWF5
5
0.19%
SMO1/SMO2
5
0.19%
IDI
5
0.19%
TDC
4
0.15%
6OMT_4OMT_SOMT
4
0.15%
CCoAOMT
4
0.15%
MVK
4
0.15%
FLS
3
0.12%
HPPR
3
0.12%
DET2
3
0.12%
DWF7
3
0.12%
CYP51G1
3
0.12%
DXS
3
0.12%
MDS/IspF
3
0.12%
MVD
3
0.12%
HMGR
3
0.12%
FPPS
3
0.12%
TYDC_DDC
2
0.08%
ISY
2
0.08%
HYD1
2
0.08%
FK
2
0.08%
MCT/IspD
2
0.08%
PMK
2
0.08%
HMGS
2
0.08%
HDR/IspH
2
0.08%
ODC
1
0.04%
XMT_MXMT_DXMT
1
0.04%
SQE
1
0.04%
CPI1
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
CMK/IspE
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 283 | 12 | POD (147) | View species results |
| Terpenoid pathway | 282 | 20 | BAHD (131) | View species results |
| Alkaloid pathway | 245 | 22 | T3O (34) | View species results |
| Flavonoid pathway | 105 | 10 | UFGT (34) | View species results |
| Steroid pathway | 80 | 11 | SMT1/SMT2/SMT3 (33) | View species results |
| Rosmarinic acid pathway | 51 | 7 | 4CL (24) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 879 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 217 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| typha_latifolia_tl.00g117120.m01.polypeptide | Alkaloid | SLS | medium | borderline |
| typha_latifolia_tl.00g123320.m01.polypeptide | Alkaloid | SLS | medium | borderline |
| typha_latifolia_tl.00g129310.m01.polypeptide | Alkaloid | SLS | medium | borderline |
| typha_latifolia_tl.00g137360.m01.polypeptide | Alkaloid | SLS | medium | borderline |
| typha_latifolia_tl.00g159960.m01.polypeptide | Alkaloid | SLS | low | borderline |
| typha_latifolia_tl.00g185230.m01.polypeptide | Alkaloid | SLS | medium | borderline |
| typha_latifolia_tl.00g186060.m01.polypeptide | Alkaloid | SLS | medium | borderline |
| typha_latifolia_tl.00g195660.m01.polypeptide | Alkaloid | SLS | medium | borderline |
| typha_latifolia_tl.00g206420.m01.polypeptide | Alkaloid | SLS | low | borderline |
| typha_latifolia_tl.00g215170.m01.polypeptide | Alkaloid | SLS | medium | borderline |
| typha_latifolia_tl.00g215180.m01.polypeptide | Alkaloid | SLS | medium | borderline |
| typha_latifolia_tl.00g244600.m01.polypeptide | Alkaloid | SLS | medium | borderline |
| typha_latifolia_tl.00g000570.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g005050.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g005060.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g007290.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g020600.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g021040.m01.polypeptide | Alkaloid | STR | medium | pass |
| typha_latifolia_tl.00g023880.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g034500.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g034740.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g042620.m01.polypeptide | Alkaloid | STR | medium | pass |
| typha_latifolia_tl.00g043240.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g043250.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g043260.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g046590.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g050230.m01.polypeptide | Alkaloid | STR | medium | pass |
| typha_latifolia_tl.00g052970.m01.polypeptide | Alkaloid | STR | medium | pass |
| typha_latifolia_tl.00g054980.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g055000.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g062090.m01.polypeptide | Alkaloid | STR | medium | pass |
| typha_latifolia_tl.00g089410.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g090100.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g094660.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g094970.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g094980.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g106970.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g126410.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g129290.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g134950.m01.polypeptide | Alkaloid | STR | medium | pass |
| typha_latifolia_tl.00g137540.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g143180.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g153540.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g157220.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g157230.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g157650.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g157660.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g163090.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g174360.m01.polypeptide | Alkaloid | STR | low | borderline |
| typha_latifolia_tl.00g182260.m01.polypeptide | Alkaloid | STR | low | borderline |