PlantSME Plant secondary metabolism enzyme database

Vitis berlandieri x riparia (vitis_berlandieri_x_riparia)

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Imported from atlas release summary for Vitis berlandieri x riparia.

2198
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 616 21 UGT (236) View species results
Alkaloid pathway 496 22 7DLGT (111) View species results
Phenylpropanoid pathway 391 11 POD (118) View species results
Flavonoid pathway 338 10 UFGT (217) View species results
Rosmarinic acid pathway 212 7 C4H (116) View species results
Steroid pathway 145 14 CAS (82) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2180 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr12.ver1.0.g171380.p01 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr12.ver1.0.g172040.p01 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr12.ver1.0.g174100.p01 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g178610.p01 Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g179570.p01 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g182570.p01 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g183910.p01 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g184430.p01 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g184440.p01 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g185060.p01 Terpenoid BAHD medium pass BAHD__00042__sp_Q500Z2_ZDH20_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g185410.p01 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g185420.p01 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g185940.p01 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g193290.p01 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g193300.p01 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g193310.p01 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr13.ver1.0.g194560.p01 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr14.ver1.0.g197730.p01 Terpenoid BAHD low borderline BAHD__00097__sp_Q9ZV87_NAPES_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr14.ver1.0.g199760.p01 Terpenoid BAHD medium pass BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr14.ver1.0.g201870.p01 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr14.ver1.0.g203570.p01 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr14.ver1.0.g206710.p01 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr14.ver1.0.g207860.p01 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr14.ver1.0.g211190.p01 Terpenoid BAHD medium pass BAHD__00004__sp_A0A0M4FCN7_RAM2_PETHY
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr14.ver1.0.g211830.p01 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr14.ver1.0.g211840.p01 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr15.ver1.0.g214720.p01 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr15.ver1.0.g219300.p01 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr15.ver1.0.g219800.p01 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr15.ver1.0.g221250.p01 Terpenoid BAHD medium pass BAHD__00048__sp_Q5M757_ZDH15_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr15.ver1.0.g221920.p01 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr15.ver1.0.g221930.p01 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr15.ver1.0.g221950.p01 Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr15.ver1.0.g221970.p01 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr15.ver1.0.g221980.p01 Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr15.ver1.0.g223620.p01 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr16.ver1.0.g225290.p01 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr16.ver1.0.g234660.p01 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr16.ver1.0.g234700.p01 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr16.ver1.0.g237090.p01 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr17.ver1.0.g238850.p01 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr17.ver1.0.g239070.p01 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr17.ver1.0.g239220.p01 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr17.ver1.0.g251240.p01 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr18.ver1.0.g251930.p01 Terpenoid BAHD medium pass BAHD__00050__sp_Q6DR03_ZDHC3_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr18.ver1.0.g252640.p01 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr18.ver1.0.g257780.p01 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr18.ver1.0.g258860.p01 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr18.ver1.0.g258880.p01 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr18.ver1.0.g258890.p01 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH