PlantSME Plant secondary metabolism enzyme database

Vitis labrusca (vitis_labrusca)

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Imported from atlas release summary for Vitis labrusca.

2307
Candidate Protein Records
2006
Pathway-Level Records
5068
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 554 21 UGT (174) View species results
Alkaloid pathway 492 22 GES (105) View species results
Phenylpropanoid pathway 358 11 POD (106) View species results
Flavonoid pathway 311 12 UFGT (187) View species results
Rosmarinic acid pathway 148 7 C4H (63) View species results
Steroid pathway 143 14 CAS (95) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1857 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 290 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
vitis_labrusca_maker-7-snap-gene-16.36-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
vitis_labrusca_maker-7-snap-gene-16.37-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
vitis_labrusca_maker-7-snap-gene-16.38-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
vitis_labrusca_maker-7-snap-gene-181.40-mRNA-1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
vitis_labrusca_maker-7-snap-gene-181.41-mRNA-1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
vitis_labrusca_maker-7-snap-gene-182.63-mRNA-1 Phenylpropanoid CAD low borderline CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
vitis_labrusca_maker-7-snap-gene-201.110-mRNA-1 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
vitis_labrusca_maker-7_random-augustus-gene-13.40-mRNA-1 Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
vitis_labrusca_maker-7_random-augustus-gene-13.43-mRNA-1 Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
vitis_labrusca_maker-7_random-augustus-gene-15.41-mRNA-1 Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
vitis_labrusca_maker-7_random-snap-gene-13.47-mRNA-1 Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
vitis_labrusca_maker-Un-augustus-gene-152.53-mRNA-1 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
vitis_labrusca_maker-Un-augustus-gene-153.42-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
vitis_labrusca_maker-Un-augustus-gene-154.43-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
vitis_labrusca_maker-Un-snap-gene-151.61-mRNA-1 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
vitis_labrusca_maker-Un-snap-gene-152.55-mRNA-1 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
vitis_labrusca_maker-Un-snap-gene-152.57-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
vitis_labrusca_maker-Un-snap-gene-152.62-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
vitis_labrusca_maker-Un-snap-gene-152.63-mRNA-1 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
vitis_labrusca_maker-Un-snap-gene-154.54-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
vitis_labrusca_snap-11-processed-gene-196.10-mRNA-1 Phenylpropanoid CAD medium pass CAD__00004__sp_B5LAT8_CAD1_CAPAN
vitis_labrusca_snap-13_random-processed-gene-6.16-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
vitis_labrusca_augustus-3-processed-gene-40.19-mRNA-1 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
vitis_labrusca_maker-1-snap-gene-33.30-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
vitis_labrusca_maker-12-augustus-gene-1.28-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
vitis_labrusca_maker-12-augustus-gene-2.21-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00008__sp_Q9S9N9_CCR1_ARATH
vitis_labrusca_maker-12-augustus-gene-245.40-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
vitis_labrusca_maker-12-snap-gene-2.26-mRNA-1 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
vitis_labrusca_maker-13-snap-gene-282.40-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
vitis_labrusca_maker-13-snap-gene-284.44-mRNA-1 Phenylpropanoid CCR low borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
vitis_labrusca_maker-13_random-snap-gene-29.38-mRNA-1 Phenylpropanoid CCR medium pass CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
vitis_labrusca_maker-13_random-snap-gene-29.39-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
vitis_labrusca_maker-13_random-snap-gene-30.42-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
vitis_labrusca_maker-14-augustus-gene-224.39-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
vitis_labrusca_maker-14-augustus-gene-277.30-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
vitis_labrusca_maker-15-snap-gene-165.52-mRNA-1 Phenylpropanoid CCR low borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
vitis_labrusca_maker-15-snap-gene-193.47-mRNA-1 Phenylpropanoid CCR low borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
vitis_labrusca_maker-18-snap-gene-107.63-mRNA-1 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
vitis_labrusca_maker-18-snap-gene-107.66-mRNA-1 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
vitis_labrusca_maker-18-snap-gene-4.43-mRNA-1 Phenylpropanoid CCR low borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
vitis_labrusca_maker-2-augustus-gene-10.34-mRNA-1 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
vitis_labrusca_maker-2-augustus-gene-86.34-mRNA-1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
vitis_labrusca_maker-4-augustus-gene-195.41-mRNA-1 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
vitis_labrusca_maker-4-snap-gene-22.50-mRNA-1 Phenylpropanoid CCR low borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
vitis_labrusca_maker-6-augustus-gene-81.52-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
vitis_labrusca_maker-9-augustus-gene-139.45-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
vitis_labrusca_snap-15-processed-gene-193.27-mRNA-1 Phenylpropanoid CCR low borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
vitis_labrusca_snap-5-processed-gene-58.15-mRNA-1 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
vitis_labrusca_maker-1-augustus-gene-207.41-mRNA-1 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00004__sp_O49499_CAMT4_ARATH
vitis_labrusca_maker-1-augustus-gene-207.42-mRNA-1 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00004__sp_O49499_CAMT4_ARATH