PlantSME Plant secondary metabolism enzyme database

Vitis rupestris x riparia (vitis_rupestris_x_riparia)

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Imported from atlas release summary for Vitis rupestris x riparia.

2313
Candidate Protein Records
2253
Pathway-Level Records
5246
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 620 20 UGT (231) View species results
Alkaloid pathway 512 26 7DLGT (98) View species results
Phenylpropanoid pathway 427 12 POD (140) View species results
Flavonoid pathway 332 11 UFGT (202) View species results
Rosmarinic acid pathway 224 7 C4H (122) View species results
Steroid pathway 138 13 CAS (81) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2197 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr07.ver1.0.g098410.p01 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr07.ver1.0.g113130.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr09.ver1.0.g142780.p01 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr10.ver1.0.g159220.p01 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr10.ver1.0.g161340.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr10.ver1.0.g165990.p01 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr11.ver1.0.g176320.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g189550.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g189560.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g189570.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g189580.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g189910.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr13.ver1.0.g207800.p01 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr13.ver1.0.g211070.p01 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr17.ver1.0.g290240.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g302440.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g309110.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g312020.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g312120.p01 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr01.ver1.0.g016720.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr02.ver1.0.g021400.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr02.ver1.0.g023020.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr02.ver1.0.g023510.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr02.ver1.0.g023980.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr07.ver1.0.g112690.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr07.ver1.0.g114530.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g118590.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g131600.p01 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr09.ver1.0.g146940.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr09.ver1.0.g146960.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr09.ver1.0.g147990.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g202370.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr13.ver1.0.g216170.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr15.ver1.0.g254670.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr15.ver1.0.g254690.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr16.ver1.0.g269290.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr17.ver1.0.g283120.p01 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g310450.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g311690.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g312470.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g312480.p01 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr01.ver1.0.g013820.p01 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr01.ver1.0.g013830.p01 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr01.ver1.0.g013850.p01 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr01.ver1.0.g013860.p01 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr01.ver1.0.g013890.p01 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr02.ver1.0.g030530.p01 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr02.ver1.0.g030560.p01 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr02.ver1.0.g030570.p01 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr02.ver1.0.g031310.p01 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC