PlantSME Plant secondary metabolism enzyme database

Zea mays (zea_mays)

Imported from atlas release summary for Zea mays.

3974
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1113 21 BAHD (546) View species results
Alkaloid pathway 966 22 NMT (393) View species results
Phenylpropanoid pathway 957 12 POD (612) View species results
Flavonoid pathway 334 13 UFGT (170) View species results
Steroid pathway 327 14 CAS (140) View species results
Rosmarinic acid pathway 277 7 C4H (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2326 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 867 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status Best Target
Zmay05G0017900.2 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay05G0017900.3 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay05G0017900.4 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay05G0042910.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay06G0002210.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay06G0002240.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay06G0008780.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay06G0014000.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay06G0019480.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay06G0019550.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay06G0019550.2 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay07G0006820.1 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay07G0006820.2 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay07G0006820.3 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay07G0006820.4 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay07G0006820.5 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay07G0013920.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay08G0004620.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay08G0013370.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay08G0023820.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay08G0023830.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay08G0028870.1 Alkaloid PMT low borderline PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay09G0002900.1 Alkaloid PMT low borderline PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay09G0002910.1 Alkaloid PMT low borderline PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay09G0006920.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay09G0010410.1 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay09G0010410.2 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay09G0010410.3 Alkaloid PMT medium borderline PMT__00001__sp_Q42963_PMT1_TOBAC
Zmay09G0012720.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay10G0011350.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Zmay10G0013870.1 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ