Zea mays (zea_mays)
Imported from atlas release summary for Zea mays.
5536
Candidate Protein Records
3974
Pathway-Level Records
8869
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
8869
Family-Level Calls
NMT
8.43%
BAHD
8.13%
POD
7.54%
4CL
5.69%
STR
4.59%
C4H
3.79%
C3'H/CYP98A
3.79%
UGT
2.58%
Other Families
55.45%
More Families (97)
IFS
216
2.44%
7DLGT
201
2.27%
UFGT
195
2.2%
SMT1/SMT2/SMT3
177
2.0%
T3O
172
1.94%
CYP76
168
1.89%
CYP71
165
1.86%
CAS
163
1.84%
F3'H/CYP75B
144
1.62%
DWF4/CYP90B1
136
1.53%
SGD
128
1.44%
F3H
120
1.35%
BR6OX2/CYP85A2
120
1.35%
TPS
119
1.34%
GES
114
1.29%
PAL
114
1.29%
CAD
102
1.15%
CSE
93
1.05%
SLS
91
1.03%
IFR
86
0.97%
RAS
83
0.94%
PMT
81
0.91%
PYKS
70
0.79%
ANR
67
0.76%
CCR
64
0.72%
HCT
63
0.71%
CYP90D1
63
0.71%
LAC
62
0.7%
TRI/TRII
61
0.69%
FNS
59
0.67%
GS
56
0.63%
F3'5'H/CYP75A
56
0.63%
CODM/T6ODM
55
0.62%
H6H
53
0.6%
BR6OX1/CYP85A1
53
0.6%
COMT
48
0.54%
COR
47
0.53%
16OMT
47
0.53%
7DLH
46
0.52%
CPR
43
0.48%
G8O/G8H
42
0.47%
F5H/CYP84A
37
0.42%
AACT
35
0.39%
MVD
34
0.38%
CNMT
33
0.37%
T16H
33
0.37%
NCS
32
0.36%
TAT
32
0.36%
CHS
31
0.35%
DFR
31
0.35%
MCT/IspD
31
0.35%
CPD/CYP90A1
30
0.34%
CYP51G1
29
0.33%
HMGS
29
0.33%
IO
27
0.3%
8HGO
27
0.3%
SQS/FDFT1
26
0.29%
DXS
23
0.26%
MVK
22
0.25%
HMGR
22
0.25%
GGPPS
21
0.24%
BBE
20
0.23%
CCoAOMT
20
0.23%
HPPR
17
0.19%
PMK
13
0.15%
MPO
12
0.14%
CYP719
12
0.14%
SQE
12
0.14%
FPPS
12
0.14%
ADC
11
0.12%
ANS/LDOX
11
0.12%
CHI
10
0.11%
SMO1/SMO2
10
0.11%
DWF5
10
0.11%
DXR
10
0.11%
ODC
9
0.1%
CMK/IspE
8
0.09%
IDI
8
0.09%
TYDC_DDC
7
0.08%
CYP80B1
7
0.08%
DWF1
7
0.08%
HDS/IspG
7
0.08%
LAMT
6
0.07%
XMT_MXMT_DXMT
6
0.07%
FK
6
0.07%
TDC
5
0.06%
ROT3/CYP90C1
5
0.06%
DWF7
5
0.06%
MDS/IspF
5
0.06%
ISY
4
0.05%
DET2
4
0.05%
HYD1
3
0.03%
6OMT_4OMT_SOMT
2
0.02%
CYP80F1
2
0.02%
CPI1
2
0.02%
HDR/IspH
1
0.01%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1113 | 21 | BAHD (546) | View species results |
| Alkaloid pathway | 966 | 22 | NMT (393) | View species results |
| Phenylpropanoid pathway | 957 | 12 | POD (612) | View species results |
| Flavonoid pathway | 334 | 13 | UFGT (170) | View species results |
| Steroid pathway | 327 | 14 | CAS (140) | View species results |
| Rosmarinic acid pathway | 277 | 7 | C4H (71) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2326 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 867 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Zmay09G0012640.1 | Alkaloid | PYKS | low | borderline |
| Zmay09G0012640.3 | Alkaloid | PYKS | low | borderline |
| Zmay09G0018170.1 | Alkaloid | PYKS | low | borderline |
| Zmay09G0024300.1 | Alkaloid | PYKS | low | borderline |
| Zmay09G0025410.1 | Alkaloid | PYKS | low | borderline |
| Zmay09G0026310.1 | Alkaloid | PYKS | low | borderline |
| Zmay10G0024490.1 | Alkaloid | PYKS | low | borderline |
| Zmay10G0024490.2 | Alkaloid | PYKS | low | borderline |
| Zmay10G0024490.3 | Alkaloid | PYKS | low | borderline |
| Zmay10G0024490.4 | Alkaloid | PYKS | low | borderline |
| Zmay10G0024490.6 | Alkaloid | PYKS | low | borderline |
| Zmay10G0024490.8 | Alkaloid | PYKS | low | borderline |
| Zmay10G0024490.9 | Alkaloid | PYKS | low | borderline |
| ZmayB73V4_ctg1900001570.1 | Alkaloid | PYKS | high | pass |
| Zmay01G0007790.1 | Alkaloid | SGD | medium | pass |
| Zmay01G0007790.2 | Alkaloid | SGD | medium | pass |
| Zmay01G0007790.3 | Alkaloid | SGD | medium | pass |
| Zmay01G0007790.4 | Alkaloid | SGD | medium | pass |
| Zmay01G0007790.5 | Alkaloid | SGD | medium | pass |
| Zmay01G0007790.6 | Alkaloid | SGD | medium | pass |
| Zmay01G0007790.7 | Alkaloid | SGD | medium | pass |
| Zmay01G0048690.1 | Alkaloid | SGD | low | borderline |
| Zmay01G0048690.3 | Alkaloid | SGD | low | borderline |
| Zmay01G0048690.4 | Alkaloid | SGD | low | borderline |
| Zmay01G0048690.5 | Alkaloid | SGD | low | borderline |
| Zmay01G0048690.6 | Alkaloid | SGD | low | borderline |
| Zmay01G0048690.7 | Alkaloid | SGD | low | borderline |
| Zmay01G0048690.8 | Alkaloid | SGD | low | borderline |
| Zmay01G0048690.9 | Alkaloid | SGD | low | borderline |
| Zmay01G0048700.1 | Alkaloid | SGD | medium | pass |
| Zmay01G0048700.2 | Alkaloid | SGD | medium | pass |
| Zmay01G0048710.10 | Alkaloid | SGD | medium | pass |
| Zmay01G0048710.2 | Alkaloid | SGD | medium | pass |
| Zmay01G0048710.3 | Alkaloid | SGD | medium | pass |
| Zmay01G0048710.4 | Alkaloid | SGD | medium | pass |
| Zmay01G0048710.5 | Alkaloid | SGD | medium | pass |
| Zmay01G0048710.6 | Alkaloid | SGD | medium | pass |
| Zmay01G0048710.7 | Alkaloid | SGD | medium | pass |
| Zmay02G0010610.1 | Alkaloid | SGD | medium | pass |
| Zmay02G0010620.1 | Alkaloid | SGD | medium | pass |
| Zmay02G0010630.1 | Alkaloid | SGD | medium | pass |
| Zmay02G0012890.1 | Alkaloid | SGD | medium | pass |
| Zmay02G0020050.1 | Alkaloid | SGD | medium | pass |
| Zmay02G0020050.2 | Alkaloid | SGD | medium | pass |
| Zmay02G0020050.3 | Alkaloid | SGD | medium | pass |
| Zmay02G0045230.1 | Alkaloid | SGD | low | borderline |
| Zmay02G0045230.2 | Alkaloid | SGD | low | borderline |
| Zmay03G0013950.1 | Alkaloid | SGD | medium | pass |
| Zmay03G0013970.1 | Alkaloid | SGD | medium | pass |
| Zmay03G0018020.1 | Alkaloid | SGD | medium | pass |