PlantSME Plant secondary metabolism enzyme database
4CL

4CL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family 4CL.

Lineage Coverage
Detected in 774 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 25907 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 25910 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 25914 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Alyrscaffold_60229790.1 arabidopsis_lyrata Alyrscaffold_60229790.1
Alyrscaffold_70253640.1 arabidopsis_lyrata Alyrscaffold_70253640.1
Alyrscaffold_70258890.1 arabidopsis_lyrata Alyrscaffold_70258890.1
Alyrscaffold_70265520.1 arabidopsis_lyrata Alyrscaffold_70265520.1
Alyrscaffold_70267960.1 arabidopsis_lyrata Alyrscaffold_70267960.1
Alyrscaffold_70267960.2 arabidopsis_lyrata Alyrscaffold_70267960.2
Alyrscaffold_70274480.1 arabidopsis_lyrata Alyrscaffold_70274480.1
Alyrscaffold_80300770.1 arabidopsis_lyrata Alyrscaffold_80300770.1
Alyrscaffold_80302900.1 arabidopsis_lyrata Alyrscaffold_80302900.1
ara_suecica_KAG7531864.1 arabidopsis_suecica ara_suecica_KAG7531864.1
ara_suecica_KAG7538789.1 arabidopsis_suecica ara_suecica_KAG7538789.1
ara_suecica_KAG7539038.1 arabidopsis_suecica ara_suecica_KAG7539038.1
ara_suecica_KAG7546413.1 arabidopsis_suecica ara_suecica_KAG7546413.1
ara_suecica_KAG7546962.1 arabidopsis_suecica ara_suecica_KAG7546962.1
ara_suecica_KAG7547677.1 arabidopsis_suecica ara_suecica_KAG7547677.1
ara_suecica_KAG7548199.1 arabidopsis_suecica ara_suecica_KAG7548199.1
ara_suecica_KAG7548200.1 arabidopsis_suecica ara_suecica_KAG7548200.1
ara_suecica_KAG7548367.1 arabidopsis_suecica ara_suecica_KAG7548367.1
ara_suecica_KAG7555466.1 arabidopsis_suecica ara_suecica_KAG7555466.1
ara_suecica_KAG7556693.1 arabidopsis_suecica ara_suecica_KAG7556693.1
ara_suecica_KAG7557391.1 arabidopsis_suecica ara_suecica_KAG7557391.1
ara_suecica_KAG7557700.1 arabidopsis_suecica ara_suecica_KAG7557700.1
ara_suecica_KAG7564962.1 arabidopsis_suecica ara_suecica_KAG7564962.1
ara_suecica_KAG7565921.1 arabidopsis_suecica ara_suecica_KAG7565921.1
ara_suecica_KAG7575228.1 arabidopsis_suecica ara_suecica_KAG7575228.1
ara_suecica_KAG7575229.1 arabidopsis_suecica ara_suecica_KAG7575229.1
ara_suecica_KAG7581581.1 arabidopsis_suecica ara_suecica_KAG7581581.1
ara_suecica_KAG7582151.1 arabidopsis_suecica ara_suecica_KAG7582151.1
ara_suecica_KAG7582246.1 arabidopsis_suecica ara_suecica_KAG7582246.1
ara_suecica_KAG7582793.1 arabidopsis_suecica ara_suecica_KAG7582793.1