PlantSME Plant secondary metabolism enzyme database
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Atlas summary family CAD.

Lineage Coverage
Detected in 777 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Prunus domestica
Pinus taeda
Hordeum vulgare
Aegilops tauschii
Related Modules
Phenylpropanoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Phenylpropanoid pathway 17134 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Entry backbone
PAL 7015 C4H/CYP73A 432 4CL 25910
Hydroxycinnamoyl and monolignol backbone
HCT 14877 C3'H/CYP98A 10198 CSE 29610 CCoAOMT 6839 CCR 4440
S/G branch and monolignol formation
F5H/CYP84A 306 COMT 22394 CAD 17134
Oxidative polymerization
LAC 28156 POD 122923
Family Gene List
GeneSpeciesProtein ID
Acom21G0005920.1 ananas_comosus Acom21G0005920.1
Acom21G0006000.1 ananas_comosus Acom21G0006000.1
Acom21G0006010.1 ananas_comosus Acom21G0006010.1
Acom22G0003290.1 ananas_comosus Acom22G0003290.1
Acom22G0006890.1 ananas_comosus Acom22G0006890.1
Acom25G0003730.1 ananas_comosus Acom25G0003730.1
Acomscaffold_23430016030.1 ananas_comosus Acomscaffold_23430016030.1
Acomscaffold_6870025830.1 ananas_comosus Acomscaffold_6870025830.1
Acomscaffold_8990029540.1 ananas_comosus Acomscaffold_8990029540.1
Arupctg000278_np121212120001860 andreaea_rupestris Arupctg000278_np121212120001860
Arupctg000563_np121212120007910 andreaea_rupestris Arupctg000563_np121212120007910
Arupctg000563_np121212120007920 andreaea_rupestris Arupctg000563_np121212120007920
Arupctg000564_np121212120009040 andreaea_rupestris Arupctg000564_np121212120009040
Arupctg000565_np121212120009420 andreaea_rupestris Arupctg000565_np121212120009420
Arupctg000565_np121212120009430 andreaea_rupestris Arupctg000565_np121212120009430
Arupctg000694_np121212120037530 andreaea_rupestris Arupctg000694_np121212120037530
Arupctg000696_np121212120038130 andreaea_rupestris Arupctg000696_np121212120038130
Arupctg000699_np121212120040290 andreaea_rupestris Arupctg000699_np121212120040290
Arupctg000699_np121212120040300 andreaea_rupestris Arupctg000699_np121212120040300
Arupctg000704_np121212120041590 andreaea_rupestris Arupctg000704_np121212120041590
Arupctg000704_np121212120041600 andreaea_rupestris Arupctg000704_np121212120041600
Arupctg000707_np121212120042740 andreaea_rupestris Arupctg000707_np121212120042740
Arupctg000707_np121212120042750 andreaea_rupestris Arupctg000707_np121212120042750
Arupctg000744_np121212120046910 andreaea_rupestris Arupctg000744_np121212120046910
Arupctg000745_np121212120046920 andreaea_rupestris Arupctg000745_np121212120046920
Arupctg000765_np121212120051090 andreaea_rupestris Arupctg000765_np121212120051090
Arupctg000771_np121212120052750 andreaea_rupestris Arupctg000771_np121212120052750
Arupctg000771_np121212120053180 andreaea_rupestris Arupctg000771_np121212120053180
Arupctg000854_np121212120069940 andreaea_rupestris Arupctg000854_np121212120069940
Arupctg000904_np121212120082980 andreaea_rupestris Arupctg000904_np121212120082980