PlantSME

Lineage Coverage

Detected in 745 of 789 public species; click a lineage to inspect its species list.

Algae

Bryophytes

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Steroid pathway 1234 current-family members Du et al. 2022; Zebosi et al. 2024

Sterol precursor formation

SQS/FDFT1 4389 SQE 4569 CAS 35857

Phytosterol backbone

SMT1/SMT2/SMT3 27781 SMO1/SMO2 4067 CPI1 1261 CYP51G1 190 FK 1234 HYD1 1364 DWF7 1524 DWF5 888 DWF1 1689

Brassinosteroid branch

DET2 1316 DWF4/CYP90B1 290 CPD/CYP90A1 103 ROT3/CYP90C1 193 CYP90D1 142 BR6OX1/CYP85A1 40 BR6OX2/CYP85A2 68

Family Gene List

Gene	Species	Protein ID
AMhypScaffold_160102070.1	amaranthus_hypochondriacus	AMhypScaffold_160102070.1
AMhypScaffold_70201980.1	amaranthus_hypochondriacus	AMhypScaffold_70201980.1
AMhypScaffold_80216740.1	amaranthus_hypochondriacus	AMhypScaffold_80216740.1
MAKER_09179-RA	amaranthus_palmeri	MAKER_09179-RA
MAKER_12837-RA	amaranthus_palmeri	MAKER_12837-RA
MAKER_22635-RA	amaranthus_palmeri	MAKER_22635-RA
MAKER_30040-RA	amaranthus_palmeri	MAKER_30040-RA
amaranthus_tricolor_g1960.t1	amaranthus_tricolor	amaranthus_tricolor_g1960.t1
amaranthus_tricolor_g23083.t1	amaranthus_tricolor	amaranthus_tricolor_g23083.t1
amaranthus_tricolor_g2311.t1	amaranthus_tricolor	amaranthus_tricolor_g2311.t1
amaranthus_tricolor_g23837.t1	amaranthus_tricolor	amaranthus_tricolor_g23837.t1
amaranthus_tricolor_g9767.t1	amaranthus_tricolor	amaranthus_tricolor_g9767.t1
At.01g003400-v1.1.a1	amaranthus_tuberculatus	At.01g003400-v1.1.a1
At.01g003410-v1.1.a1	amaranthus_tuberculatus	At.01g003410-v1.1.a1
At.01g053580-v1.1.a1	amaranthus_tuberculatus	At.01g053580-v1.1.a1
At.06g121040-v1.1.a1	amaranthus_tuberculatus	At.06g121040-v1.1.a1
At.06g224140-v1.1.a1	amaranthus_tuberculatus	At.06g224140-v1.1.a1
At.07g242010-v1.1.a1	amaranthus_tuberculatus	At.07g242010-v1.1.a1
At.08g256000-v1.1.a1	amaranthus_tuberculatus	At.08g256000-v1.1.a1
AtriAmTr_v1.0_scaffold000010003950.1	amborella_trichopoda	AtriAmTr_v1.0_scaffold000010003950.1
AtriAmTr_v1.0_scaffold000060024700.1	amborella_trichopoda	AtriAmTr_v1.0_scaffold000060024700.1
AtriAmTr_v1.0_scaffold000060024710.1	amborella_trichopoda	AtriAmTr_v1.0_scaffold000060024710.1
AtriAmTr_v1.0_scaffold000100037300.1	amborella_trichopoda	AtriAmTr_v1.0_scaffold000100037300.1
AtriAmTr_v1.0_scaffold000400115220.1	amborella_trichopoda	AtriAmTr_v1.0_scaffold000400115220.1
AtriAmTr_v1.0_scaffold000660167050.1	amborella_trichopoda	AtriAmTr_v1.0_scaffold000660167050.1
AnanContig000630044410.1	ammopiptanthus_nanus	AnanContig000630044410.1
AnanContig000670051210.1	ammopiptanthus_nanus	AnanContig000670051210.1
AnanContig000980070660.1	ammopiptanthus_nanus	AnanContig000980070660.1
AnanContig001470107800.1	ammopiptanthus_nanus	AnanContig001470107800.1
AnanContig001810127270.1	ammopiptanthus_nanus	AnanContig001810127270.1