PlantSME Plant secondary metabolism enzyme database
GPPS

GPPS

Atlas summary family GPPS.

Lineage Coverage
Detected in 90 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Nyssa yunnanensis
Aegilops tauschii
Rhododendron molle
Oryza sativa.spZS97
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 135 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
FanaFAN_r2.3ch1X2b0488040 fragaria_ananassa FanaFAN_r2.3ch1X2b0488040
FanaFAN_r2.3ch2Bib0595540 fragaria_ananassa FanaFAN_r2.3ch2Bib0595540
FanaFAN_r2.3ch2X1a0618820 fragaria_ananassa FanaFAN_r2.3ch2X1a0618820
FanaFAN_r2.3ch2X1b0646340 fragaria_ananassa FanaFAN_r2.3ch2X1b0646340
FanaFAN_r2.3ch3Ava0687980 fragaria_ananassa FanaFAN_r2.3ch3Ava0687980
FanaFAN_r2.3ch3Avb0718440 fragaria_ananassa FanaFAN_r2.3ch3Avb0718440
FanaFAN_r2.3ch3X1a0774880 fragaria_ananassa FanaFAN_r2.3ch3X1a0774880
FanaFAN_r2.3ch3X2a0852530 fragaria_ananassa FanaFAN_r2.3ch3X2a0852530
FanaFAN_r2.3ch3X2b0876220 fragaria_ananassa FanaFAN_r2.3ch3X2b0876220
fragaria_chiloensis_augustus_masked-1A-processed-gene-76.93-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-1A-processed-gene-76.93-mRNA-1
fragaria_chiloensis_augustus_masked-1B-processed-gene-76.7-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-1B-processed-gene-76.7-mRNA-1
fragaria_chiloensis_augustus_masked-1C-processed-gene-67.119-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-1C-processed-gene-67.119-mRNA-1
fragaria_chiloensis_maker-1D-exonerate_protein2genome-gene-192.51-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-1D-exonerate_protein2genome-gene-192.51-mRNA-1
fragaria_chiloensis_maker-2A-augustus-gene-155.89-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2A-augustus-gene-155.89-mRNA-1
fragaria_chiloensis_maker-2B-augustus-gene-132.0-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2B-augustus-gene-132.0-mRNA-1
fragaria_chiloensis_maker-2C-augustus-gene-166.5-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2C-augustus-gene-166.5-mRNA-1
fragaria_chiloensis_maker-2D-augustus-gene-81.51-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2D-augustus-gene-81.51-mRNA-1
fragaria_chiloensis_maker-3A-augustus-gene-289.113-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3A-augustus-gene-289.113-mRNA-1
fragaria_chiloensis_maker-3B-augustus-gene-23.73-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3B-augustus-gene-23.73-mRNA-1
fragaria_chiloensis_maker-3C-augustus-gene-28.151-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3C-augustus-gene-28.151-mRNA-1
fragaria_chiloensis_maker-3D-augustus-gene-272.114-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3D-augustus-gene-272.114-mRNA-1
fragaria_iinumae_evm.model.scaf_4.2336 fragaria_iinumae fragaria_iinumae_evm.model.scaf_4.2336
fragaria_iinumae_evm.model.scaf_4.2342 fragaria_iinumae fragaria_iinumae_evm.model.scaf_4.2342
fragaria_iinumae_evm.model.scaf_79.1263 fragaria_iinumae fragaria_iinumae_evm.model.scaf_79.1263
fragaria_iinumae_evm.model.scaf_93.463 fragaria_iinumae fragaria_iinumae_evm.model.scaf_93.463
fragaria_mandshurica_evm.model.chr1.1072 fragaria_mandshurica fragaria_mandshurica_evm.model.chr1.1072
fragaria_mandshurica_evm.model.chr2.1136 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.1136
fragaria_mandshurica_evm.model.chr3.467 fragaria_mandshurica fragaria_mandshurica_evm.model.chr3.467
fragaria_mandshurica_evm.model.chr4.2786 fragaria_mandshurica fragaria_mandshurica_evm.model.chr4.2786
FnilGWHABKC000000020059990.1 fragaria_nilgerrensis FnilGWHABKC000000020059990.1