PlantSME Plant secondary metabolism enzyme database
HDR/IspH

HDR/IspH

ID: HDR_IspH

Atlas summary family HDR_IspH.

Lineage Coverage
Detected in 765 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Lactuca sativa
Glebionis coronaria
Brasenia schreberi
Hordeum vulgare
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1720 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
FanaFAN_r2.3ch2Avb0537300 fragaria_ananassa FanaFAN_r2.3ch2Avb0537300
FanaFAN_r2.3ch2Avb0547890 fragaria_ananassa FanaFAN_r2.3ch2Avb0547890
FanaFAN_r2.3ch2X1b0651910 fragaria_ananassa FanaFAN_r2.3ch2X1b0651910
fragaria_chiloensis_maker-2A-augustus-gene-233.5-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2A-augustus-gene-233.5-mRNA-1
fragaria_chiloensis_maker-2A-exonerate_protein2genome-gene-233.47-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2A-exonerate_protein2genome-gene-233.47-mRNA-1
fragaria_chiloensis_maker-2B-augustus-gene-61.2-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2B-augustus-gene-61.2-mRNA-1
fragaria_chiloensis_maker-2B-augustus-gene-63.3-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2B-augustus-gene-63.3-mRNA-1
fragaria_chiloensis_maker-2C-augustus-gene-237.41-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2C-augustus-gene-237.41-mRNA-1
fragaria_chiloensis_maker-2C-augustus-gene-238.36-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2C-augustus-gene-238.36-mRNA-1
fragaria_chiloensis_maker-2D-augustus-gene-146.7-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2D-augustus-gene-146.7-mRNA-1
fragaria_iinumae_evm.model.scaf_51.372 fragaria_iinumae fragaria_iinumae_evm.model.scaf_51.372
fragaria_iinumae_evm.model.scaf_51.755 fragaria_iinumae fragaria_iinumae_evm.model.scaf_51.755
fragaria_iinumae_evm.model.scaf_51.771 fragaria_iinumae fragaria_iinumae_evm.model.scaf_51.771
fragaria_mandshurica_evm.model.chr2.452 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.452
FnilGWHABKC000000040146280.1 fragaria_nilgerrensis FnilGWHABKC000000040146280.1
FnilGWHABKC000000040146300.1 fragaria_nilgerrensis FnilGWHABKC000000040146300.1
fragaria_nipponica_augustus_masked-chr2-processed-gene-310.37-mRNA-1 fragaria_nipponica fragaria_nipponica_augustus_masked-chr2-processed-gene-310.37-mRNA-1
fragaria_nipponica_maker-chr2-augustus-gene-309.2-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr2-augustus-gene-309.2-mRNA-1
fragaria_nipponica_maker-chr2-augustus-gene-310.43-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr2-augustus-gene-310.43-mRNA-1
fragaria_nipponica_maker-chr2-exonerate_protein2genome-gene-308.44-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr2-exonerate_protein2genome-gene-308.44-mRNA-1
fragaria_nubicola_evm.model.ctg105.49 fragaria_nubicola fragaria_nubicola_evm.model.ctg105.49
Fves02G0011550.1 fragaria_vesca Fves02G0011550.1
Fves06G0010730.1 fragaria_vesca Fves06G0010730.1
fragaria_x_ananassa_augustus_masked-Fvb2-3-processed-gene-174.3-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_augustus_masked-Fvb2-3-processed-gene-174.3-mRNA-1
fragaria_x_ananassa_maker-Fvb2-1-augustus-gene-39.21-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-1-augustus-gene-39.21-mRNA-1
fragaria_x_ananassa_maker-Fvb2-2-augustus-gene-174.33-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-2-augustus-gene-174.33-mRNA-1
fragaria_x_ananassa_maker-Fvb2-2-snap-gene-174.43-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-2-snap-gene-174.43-mRNA-1
fragaria_x_ananassa_maker-Fvb2-3-augustus-gene-175.16-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-3-augustus-gene-175.16-mRNA-1
fragaria_x_ananassa_maker-Fvb2-4-augustus-gene-46.29-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-4-augustus-gene-46.29-mRNA-1
fragaria_x_ananassa_snap_masked-Fvb2-4-processed-gene-55.17-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_snap_masked-Fvb2-4-processed-gene-55.17-mRNA-1