PlantSME Plant secondary metabolism enzyme database
HMGS

HMGS

Atlas summary family HMGS.

Lineage Coverage
Detected in 766 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Aegilops tauschii
Hordeum vulgare
Triticum turgidum
Zea mays
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 2158 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
FanaFAN_r2.3ch2Bib0595470 fragaria_ananassa FanaFAN_r2.3ch2Bib0595470
FanaFAN_r2.3ch2X1a0618910 fragaria_ananassa FanaFAN_r2.3ch2X1a0618910
FanaFAN_r2.3ch2X1b0649190 fragaria_ananassa FanaFAN_r2.3ch2X1b0649190
FanaFAN_r2.3ch3Ava0710890 fragaria_ananassa FanaFAN_r2.3ch3Ava0710890
FanaFAN_r2.3ch4Bia0944530 fragaria_ananassa FanaFAN_r2.3ch4Bia0944530
FanaFAN_r2.3ch4Bia0947260 fragaria_ananassa FanaFAN_r2.3ch4Bia0947260
FanaFAN_r2.3ch4Bib0956960 fragaria_ananassa FanaFAN_r2.3ch4Bib0956960
FanaFAN_r2.3ch4Bib0959620 fragaria_ananassa FanaFAN_r2.3ch4Bib0959620
FanaFAN_r2.3ch4X1a0981610 fragaria_ananassa FanaFAN_r2.3ch4X1a0981610
FanaFAN_r2.3ch4X1a0983630 fragaria_ananassa FanaFAN_r2.3ch4X1a0983630
FanaFAN_r2.3ch4X1b1007910 fragaria_ananassa FanaFAN_r2.3ch4X1b1007910
FanaFAN_r2.3ch4X1b1010350 fragaria_ananassa FanaFAN_r2.3ch4X1b1010350
FanaFAN_r2.3ch6Av2a1293000 fragaria_ananassa FanaFAN_r2.3ch6Av2a1293000
FanaFAN_r2.3ch6Av2a1295400 fragaria_ananassa FanaFAN_r2.3ch6Av2a1295400
FanaFAN_r2.3ch6Av2b1314430 fragaria_ananassa FanaFAN_r2.3ch6Av2b1314430
FanaFAN_r2.3ch6Bia1329400 fragaria_ananassa FanaFAN_r2.3ch6Bia1329400
FanaFAN_r2.3ch6Bia1350860 fragaria_ananassa FanaFAN_r2.3ch6Bia1350860
FanaFAN_r2.3ch6Bia1352450 fragaria_ananassa FanaFAN_r2.3ch6Bia1352450
FanaFAN_r2.3ch6Bib1367670 fragaria_ananassa FanaFAN_r2.3ch6Bib1367670
FanaFAN_r2.3ch6Bib1388430 fragaria_ananassa FanaFAN_r2.3ch6Bib1388430
FanaFAN_r2.3ch6Bib1390060 fragaria_ananassa FanaFAN_r2.3ch6Bib1390060
FanaFAN_r2.3ch6X1b1443880 fragaria_ananassa FanaFAN_r2.3ch6X1b1443880
fragaria_chiloensis_augustus_masked-2A-processed-gene-156.117-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-2A-processed-gene-156.117-mRNA-1
fragaria_chiloensis_augustus_masked-2B-processed-gene-131.72-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-2B-processed-gene-131.72-mRNA-1
fragaria_chiloensis_augustus_masked-2B-processed-gene-131.73-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-2B-processed-gene-131.73-mRNA-1
fragaria_chiloensis_augustus_masked-2C-processed-gene-167.62-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-2C-processed-gene-167.62-mRNA-1
fragaria_chiloensis_augustus_masked-4A-processed-gene-68.7-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-4A-processed-gene-68.7-mRNA-1
fragaria_chiloensis_augustus_masked-6A-processed-gene-224.3-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-6A-processed-gene-224.3-mRNA-1
fragaria_chiloensis_maker-2D-augustus-gene-83.46-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2D-augustus-gene-83.46-mRNA-1
fragaria_chiloensis_maker-3A-augustus-gene-95.61-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3A-augustus-gene-95.61-mRNA-1