PlantSME Plant secondary metabolism enzyme database
HMGS

HMGS

Atlas summary family HMGS.

Lineage Coverage
Detected in 766 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Aegilops tauschii
Hordeum vulgare
Triticum turgidum
Zea mays
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 2158 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
fragaria_chiloensis_maker-3B-augustus-gene-219.0-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3B-augustus-gene-219.0-mRNA-1
fragaria_chiloensis_maker-3C-augustus-gene-241.16-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3C-augustus-gene-241.16-mRNA-1
fragaria_chiloensis_maker-3D-augustus-gene-79.29-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3D-augustus-gene-79.29-mRNA-1
fragaria_chiloensis_maker-4A-augustus-gene-87.135-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-4A-augustus-gene-87.135-mRNA-1
fragaria_chiloensis_maker-4B-augustus-gene-57.12-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-4B-augustus-gene-57.12-mRNA-1
fragaria_chiloensis_maker-4C-augustus-gene-68.3-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-4C-augustus-gene-68.3-mRNA-1
fragaria_chiloensis_maker-4C-augustus-gene-88.36-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-4C-augustus-gene-88.36-mRNA-1
fragaria_chiloensis_maker-4D-augustus-gene-200.137-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-4D-augustus-gene-200.137-mRNA-1
fragaria_chiloensis_maker-4D-augustus-gene-221.3-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-4D-augustus-gene-221.3-mRNA-1
fragaria_chiloensis_maker-6A-augustus-gene-1.196-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-6A-augustus-gene-1.196-mRNA-1
fragaria_chiloensis_maker-6A-augustus-gene-15.184-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-6A-augustus-gene-15.184-mRNA-1
fragaria_chiloensis_maker-6A-exonerate_protein2genome-gene-223.86-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-6A-exonerate_protein2genome-gene-223.86-mRNA-1
fragaria_chiloensis_maker-6B-augustus-gene-12.198-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-6B-augustus-gene-12.198-mRNA-1
fragaria_chiloensis_maker-6B-augustus-gene-2.87-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-6B-augustus-gene-2.87-mRNA-1
fragaria_chiloensis_maker-6B-augustus-gene-246.7-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-6B-augustus-gene-246.7-mRNA-1
fragaria_chiloensis_maker-6D-augustus-gene-337.19-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-6D-augustus-gene-337.19-mRNA-1
fragaria_iinumae_evm.model.scaf_10.195.1 fragaria_iinumae fragaria_iinumae_evm.model.scaf_10.195.1
fragaria_iinumae_evm.model.scaf_4.2350 fragaria_iinumae fragaria_iinumae_evm.model.scaf_4.2350
fragaria_iinumae_evm.model.scaf_41.73 fragaria_iinumae fragaria_iinumae_evm.model.scaf_41.73
fragaria_iinumae_evm.model.scaf_45.19 fragaria_iinumae fragaria_iinumae_evm.model.scaf_45.19
fragaria_iinumae_evm.model.scaf_54.1093 fragaria_iinumae fragaria_iinumae_evm.model.scaf_54.1093
fragaria_iinumae_evm.model.scaf_78.478.1 fragaria_iinumae fragaria_iinumae_evm.model.scaf_78.478.1
fragaria_iinumae_evm.model.scaf_91.1382 fragaria_iinumae fragaria_iinumae_evm.model.scaf_91.1382
fragaria_mandshurica_evm.model.chr2.1132 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.1132
fragaria_mandshurica_evm.model.chr4.1947 fragaria_mandshurica fragaria_mandshurica_evm.model.chr4.1947
fragaria_mandshurica_evm.model.chr4.2114 fragaria_mandshurica fragaria_mandshurica_evm.model.chr4.2114
fragaria_mandshurica_evm.model.chr4.2186 fragaria_mandshurica fragaria_mandshurica_evm.model.chr4.2186
fragaria_mandshurica_evm.model.chr6.4581 fragaria_mandshurica fragaria_mandshurica_evm.model.chr6.4581
fragaria_mandshurica_evm.model.chr6.765 fragaria_mandshurica fragaria_mandshurica_evm.model.chr6.765
FnilGWHABKC000000010018830.1 fragaria_nilgerrensis FnilGWHABKC000000010018830.1