PlantSME

Lineage Coverage

Detected in 760 of 789 public species; click a lineage to inspect its species list.

Algae

Bryophytes

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Rosmarinic acid pathway 5065 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009

Phenylalanine donor branch

PAL 7015 C4H 48992 4CL 25914

Tyrosine acceptor branch

TAT 14219 HPPR 5065

Condensation and hydroxylation

RAS 13433 CPR 5870

Family Gene List

Gene	Species	Protein ID
Cr_00953.1\|Cr_LG_1:10568558-10569590\|minus\|	cicer_reticulatum	Cr_00953.1\|Cr_LG_1:10568558-10569590\|minus\|
Cr_03416.1\|Cr_LG_2:4259575-4260981\|minus\|	cicer_reticulatum	Cr_03416.1\|Cr_LG_2:4259575-4260981\|minus\|
Cr_03744.1\|Cr_LG_2:9667247-9669391\|minus\|	cicer_reticulatum	Cr_03744.1\|Cr_LG_2:9667247-9669391\|minus\|
Cr_06762.1\|Cr_LG_3:23412189-23417444\|minus\|	cicer_reticulatum	Cr_06762.1\|Cr_LG_3:23412189-23417444\|minus\|
Cr_09052.1\|Cr_LG_4:17673094-17673680\|plus\|	cicer_reticulatum	Cr_09052.1\|Cr_LG_4:17673094-17673680\|plus\|
Cr_09053.1\|Cr_LG_4:17682885-17685582\|plus\|	cicer_reticulatum	Cr_09053.1\|Cr_LG_4:17682885-17685582\|plus\|
Cr_09056.1\|Cr_LG_4:17698613-17703876\|plus\|	cicer_reticulatum	Cr_09056.1\|Cr_LG_4:17698613-17703876\|plus\|
Cr_11813.1\|Cr_LG_5:8519947-8522092\|plus\|	cicer_reticulatum	Cr_11813.1\|Cr_LG_5:8519947-8522092\|plus\|
Cr_13731.1\|Cr_LG_5:36679181-36684946\|minus\|	cicer_reticulatum	Cr_13731.1\|Cr_LG_5:36679181-36684946\|minus\|
Cr_13964.1\|Cr_LG_5:41477110-41478795\|minus\|	cicer_reticulatum	Cr_13964.1\|Cr_LG_5:41477110-41478795\|minus\|
Cr_14004.1\|Cr_LG_5:41913616-41914871\|plus\|	cicer_reticulatum	Cr_14004.1\|Cr_LG_5:41913616-41914871\|plus\|
Cr_15580.1\|Cr_LG_6:18002070-18004981\|plus\|	cicer_reticulatum	Cr_15580.1\|Cr_LG_6:18002070-18004981\|plus\|
Cr_15598.1\|Cr_LG_6:18277746-18281880\|minus\|	cicer_reticulatum	Cr_15598.1\|Cr_LG_6:18277746-18281880\|minus\|
Cr_16902.1\|Cr_LG_6:37389283-37393955\|minus\|	cicer_reticulatum	Cr_16902.1\|Cr_LG_6:37389283-37393955\|minus\|
Cr_16998.1\|Cr_LG_6:39759324-39761662\|plus\|	cicer_reticulatum	Cr_16998.1\|Cr_LG_6:39759324-39761662\|plus\|
Cr_17516.1\|Cr_LG_6:51092775-51095909\|plus\|	cicer_reticulatum	Cr_17516.1\|Cr_LG_6:51092775-51095909\|plus\|
Cr_17730.1\|Cr_LG_6:54401423-54404386\|plus\|	cicer_reticulatum	Cr_17730.1\|Cr_LG_6:54401423-54404386\|plus\|
Cr_20150.1\|Cr_LG_7:34176699-34179054\|minus\|	cicer_reticulatum	Cr_20150.1\|Cr_LG_7:34176699-34179054\|minus\|
Cr_20993.1\|Cr_LG_8:5974047-5977014\|plus\|	cicer_reticulatum	Cr_20993.1\|Cr_LG_8:5974047-5977014\|plus\|
Cr_20994.1\|Cr_LG_8:5980225-5982846\|plus\|	cicer_reticulatum	Cr_20994.1\|Cr_LG_8:5980225-5982846\|plus\|
Cr_20995.1\|Cr_LG_8:6003014-6006099\|plus\|	cicer_reticulatum	Cr_20995.1\|Cr_LG_8:6003014-6006099\|plus\|
Cr_20996.1\|Cr_LG_8:6013744-6016748\|plus\|	cicer_reticulatum	Cr_20996.1\|Cr_LG_8:6013744-6016748\|plus\|
Cr_20997.1\|Cr_LG_8:6031032-6034818\|plus\|	cicer_reticulatum	Cr_20997.1\|Cr_LG_8:6031032-6034818\|plus\|
Cr_20998.1\|Cr_LG_8:6035685-6037377\|plus\|	cicer_reticulatum	Cr_20998.1\|Cr_LG_8:6035685-6037377\|plus\|
Cr_21417.1\|Cr_LG_8:10370709-10374023\|plus\|	cicer_reticulatum	Cr_21417.1\|Cr_LG_8:10370709-10374023\|plus\|
Cr_22282.1\|scaffold162:249310-251507\|plus\|	cicer_reticulatum	Cr_22282.1\|scaffold162:249310-251507\|plus\|
Cr_23689.1\|scaffold1816:26783-31547\|minus\|	cicer_reticulatum	Cr_23689.1\|scaffold1816:26783-31547\|minus\|
cinchona_pubescens_g10785.t1	cinchona_pubescens	cinchona_pubescens_g10785.t1
cinchona_pubescens_g16497.t1	cinchona_pubescens	cinchona_pubescens_g16497.t1
cinchona_pubescens_g19330.t1	cinchona_pubescens	cinchona_pubescens_g19330.t1