PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Apal875710244280 aulacomnium_palustre Apal875710244280
Aturscaffold_10001760 aulacomnium_turgidum Aturscaffold_10001760
AatlScoFOjO_1310_17880002770.1 avena_atlantica AatlScoFOjO_1310_17880002770.1
AatlScoFOjO_1310_17880015470.1 avena_atlantica AatlScoFOjO_1310_17880015470.1
AatlScoFOjO_1760_23990185350.1 avena_atlantica AatlScoFOjO_1760_23990185350.1
AVeriSctCcfP_2055_39360144940.1 avena_eriantha AVeriSctCcfP_2055_39360144940.1
AVeriSctCcfP_2331_44820238820.1 avena_eriantha AVeriSctCcfP_2331_44820238820.1
AVeriSctCcfP_4_40392880.1 avena_eriantha AVeriSctCcfP_4_40392880.1
AVESA.00010b.r1.1AG0020330.1 avena_sativa AVESA.00010b.r1.1AG0020330.1
AVESA.00010b.r1.1CG0106970.1 avena_sativa AVESA.00010b.r1.1CG0106970.1
AVESA.00010b.r1.2AG0234630.1 avena_sativa AVESA.00010b.r1.2AG0234630.1
AVESA.00010b.r1.2CG0289780.1 avena_sativa AVESA.00010b.r1.2CG0289780.1
AVESA.00010b.r1.2CG0313960.1 avena_sativa AVESA.00010b.r1.2CG0313960.1
AVESA.00010b.r1.2DG0368840.1 avena_sativa AVESA.00010b.r1.2DG0368840.1
AVESA.00010b.r1.3CG0493910.1 avena_sativa AVESA.00010b.r1.3CG0493910.1
AVESA.00010b.r1.6AG1031470.1 avena_sativa AVESA.00010b.r1.6AG1031470.1
AVESA.00010b.r1.6CG1083340.1 avena_sativa AVESA.00010b.r1.6CG1083340.1
AVESA.00010b.r1.6DG1168440.1 avena_sativa AVESA.00010b.r1.6DG1168440.1
AVESA.00010b.r1.UnG1449870.1 avena_sativa AVESA.00010b.r1.UnG1449870.1
Acar01G0008620.1 averrhoa_carambola Acar01G0008620.1
Acar03G0019720.1 averrhoa_carambola Acar03G0019720.1
Acar06G0018970.1 averrhoa_carambola Acar06G0018970.1
Acar08G0019230.1 averrhoa_carambola Acar08G0019230.1
avicennia_marina_AM_04801 avicennia_marina avicennia_marina_AM_04801
avicennia_marina_AM_05252 avicennia_marina avicennia_marina_AM_05252
avicennia_marina_AM_07946 avicennia_marina avicennia_marina_AM_07946
avicennia_marina_AM_31563 avicennia_marina avicennia_marina_AM_31563
balanophora_fungosa_var._globosa_BALA03375 balanophora_fungosa_var_globosa balanophora_fungosa_var._globosa_BALA03375
balanophora_fungosa_var._globosa_BALA07362 balanophora_fungosa_var_globosa balanophora_fungosa_var._globosa_BALA07362
BAvulContig10640005670.1 barbarea_vulgaris BAvulContig10640005670.1