PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
XP_027349842.1 abrus_precatorius XP_027349842.1
XP_027349843.1 abrus_precatorius XP_027349843.1
acacia_pycnantha_KAI9100111.1 acacia_pycnantha acacia_pycnantha_KAI9100111.1
acacia_pycnantha_KAI9114004.1 acacia_pycnantha acacia_pycnantha_KAI9114004.1
acacia_pycnantha_KAI9122347.1 acacia_pycnantha acacia_pycnantha_KAI9122347.1
acer_truncatum_Atru.chr5.1961 acer_truncatum acer_truncatum_Atru.chr5.1961
Acyan04G0159000.1 acer_yangbiense Acyan04G0159000.1
aconitum_vilmorinianum_GWHPBRAL015906 aconitum_vilmorinianum aconitum_vilmorinianum_GWHPBRAL015906
aconitum_vilmorinianum_GWHPBRAL058692 aconitum_vilmorinianum aconitum_vilmorinianum_GWHPBRAL058692
acorus_americanus_Acora.01G205700.1.p acorus_americanus acorus_americanus_Acora.01G205700.1.p
acorus_americanus_Acora.01G205800.1.p acorus_americanus acorus_americanus_Acora.01G205800.1.p
acorus_americanus_Acora.10G096700.1.p acorus_americanus acorus_americanus_Acora.10G096700.1.p
acorus_americanus_Acora.10G096900.1.p acorus_americanus acorus_americanus_Acora.10G096900.1.p
acorus_gramineus_AGRA_04312 acorus_gramineus acorus_gramineus_AGRA_04312
acorus_gramineus_AGRA_07277 acorus_gramineus acorus_gramineus_AGRA_07277
ATA11.1037.t1 acorus_tatarinowii ATA11.1037.t1
ATA4.1632.t1 acorus_tatarinowii ATA4.1632.t1
Achi17G0002070.1 actinidia_chinensis Achi17G0002070.1
Achi23G0002150.1 actinidia_chinensis Achi23G0002150.1
ACeri17G0012140 actinidia_eriantha ACeri17G0012140
ACeri23G0002850 actinidia_eriantha ACeri23G0002850
actinidia_hemsleyana_GWHPCBQA000516 actinidia_hemsleyana actinidia_hemsleyana_GWHPCBQA000516
actinidia_hemsleyana_GWHPCBQA000519 actinidia_hemsleyana actinidia_hemsleyana_GWHPCBQA000519
actinidia_hemsleyana_GWHPCBQA026071 actinidia_hemsleyana actinidia_hemsleyana_GWHPCBQA026071
actinidia_hemsleyana_GWHPCBQA035704 actinidia_hemsleyana actinidia_hemsleyana_GWHPCBQA035704
actinidia_zhejiangensis_GWHPCBQB027257 actinidia_zhejiangensis actinidia_zhejiangensis_GWHPCBQB027257
actinidia_zhejiangensis_GWHPCBQB037304 actinidia_zhejiangensis actinidia_zhejiangensis_GWHPCBQB037304
actinidia_zhejiangensis_GWHPCBQB076303 actinidia_zhejiangensis actinidia_zhejiangensis_GWHPCBQB076303
actinidia_zhejiangensis_GWHPCBQB086495 actinidia_zhejiangensis actinidia_zhejiangensis_GWHPCBQB086495
Acor01G0001260.1 aegiceras_corniculatum Acor01G0001260.1