PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
nelumbo_lutea_NL5g_28377.1 nelumbo_lutea nelumbo_lutea_NL5g_28377.1
nelumbo_lutea_NL6g_30338.1 nelumbo_lutea nelumbo_lutea_NL6g_30338.1
nelumbo_lutea_NL7g_32879.1 nelumbo_lutea nelumbo_lutea_NL7g_32879.1
nelumbo_lutea_NL7g_32880.1 nelumbo_lutea nelumbo_lutea_NL7g_32880.1
nelumbo_lutea_NL7g_33493.1 nelumbo_lutea nelumbo_lutea_NL7g_33493.1
nelumbo_lutea_NL7g_33944.1 nelumbo_lutea nelumbo_lutea_NL7g_33944.1
Nnucmegascaffold_10002180.1 nelumbo_nucifera Nnucmegascaffold_10002180.1
Nnucmegascaffold_10011290.1 nelumbo_nucifera Nnucmegascaffold_10011290.1
Nnucmegascaffold_10021760.1 nelumbo_nucifera Nnucmegascaffold_10021760.1
Nnucmegascaffold_10043940.1 nelumbo_nucifera Nnucmegascaffold_10043940.1
Nnucmegascaffold_110063910.1 nelumbo_nucifera Nnucmegascaffold_110063910.1
Nnucmegascaffold_120069520.1 nelumbo_nucifera Nnucmegascaffold_120069520.1
Nnucmegascaffold_20111170.1 nelumbo_nucifera Nnucmegascaffold_20111170.1
Nnucmegascaffold_250135660.1 nelumbo_nucifera Nnucmegascaffold_250135660.1
Nnucmegascaffold_30147600.1 nelumbo_nucifera Nnucmegascaffold_30147600.1
Nnucmegascaffold_40169880.1 nelumbo_nucifera Nnucmegascaffold_40169880.1
Nnucmegascaffold_40171480.1 nelumbo_nucifera Nnucmegascaffold_40171480.1
Nnucmegascaffold_40183130.1 nelumbo_nucifera Nnucmegascaffold_40183130.1
Nnucmegascaffold_50188860.1 nelumbo_nucifera Nnucmegascaffold_50188860.1
Nnucmegascaffold_50204920.1 nelumbo_nucifera Nnucmegascaffold_50204920.1
Nnucmegascaffold_60217520.1 nelumbo_nucifera Nnucmegascaffold_60217520.1
Nnucmegascaffold_60218710.1 nelumbo_nucifera Nnucmegascaffold_60218710.1
Nnucmegascaffold_670230490.1 nelumbo_nucifera Nnucmegascaffold_670230490.1
Nnucmegascaffold_70232820.1 nelumbo_nucifera Nnucmegascaffold_70232820.1
Nnucmegascaffold_80255320.1 nelumbo_nucifera Nnucmegascaffold_80255320.1
neolamarckia_cadamba_evm.model.Contig12.106 neolamarckia_cadamba neolamarckia_cadamba_evm.model.Contig12.106
neolamarckia_cadamba_evm.model.Contig139.54 neolamarckia_cadamba neolamarckia_cadamba_evm.model.Contig139.54
neolamarckia_cadamba_evm.model.Contig154.202 neolamarckia_cadamba neolamarckia_cadamba_evm.model.Contig154.202
neolamarckia_cadamba_evm.model.Contig154.391 neolamarckia_cadamba neolamarckia_cadamba_evm.model.Contig154.391
neolamarckia_cadamba_evm.model.Contig207.218 neolamarckia_cadamba neolamarckia_cadamba_evm.model.Contig207.218