PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
nicotiana_benthamiana_Niben261Chr01g1362001.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr01g1362001.1
nicotiana_benthamiana_Niben261Chr01g1362002.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr01g1362002.1
nicotiana_benthamiana_Niben261Chr01g1462003.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr01g1462003.1
nicotiana_benthamiana_Niben261Chr02g0472014.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr02g0472014.1
nicotiana_benthamiana_Niben261Chr02g1448002.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr02g1448002.1
nicotiana_benthamiana_Niben261Chr04g1397002.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr04g1397002.1
nicotiana_benthamiana_Niben261Chr05g1253007.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr05g1253007.1
nicotiana_benthamiana_Niben261Chr06g0497002.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr06g0497002.1
nicotiana_benthamiana_Niben261Chr06g0644017.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr06g0644017.1
nicotiana_benthamiana_Niben261Chr06g1193005.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr06g1193005.1
nicotiana_benthamiana_Niben261Chr07g0000008.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr07g0000008.1
nicotiana_benthamiana_Niben261Chr07g1048010.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr07g1048010.1
nicotiana_benthamiana_Niben261Chr08g0309006.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr08g0309006.1
nicotiana_benthamiana_Niben261Chr08g0700019.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr08g0700019.1
nicotiana_benthamiana_Niben261Chr08g1133010.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr08g1133010.1
nicotiana_benthamiana_Niben261Chr09g0026011.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr09g0026011.1
nicotiana_benthamiana_Niben261Chr09g1011006.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr09g1011006.1
nicotiana_benthamiana_Niben261Chr09g1011010.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr09g1011010.1
nicotiana_benthamiana_Niben261Chr09g1311008.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr09g1311008.1
nicotiana_benthamiana_Niben261Chr10g0328001.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr10g0328001.1
nicotiana_benthamiana_Niben261Chr13g0556006.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr13g0556006.1
nicotiana_benthamiana_Niben261Chr13g1132013.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr13g1132013.1
nicotiana_benthamiana_Niben261Chr14g0850013.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr14g0850013.1
nicotiana_benthamiana_Niben261Chr15g0903009.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr15g0903009.1
nicotiana_benthamiana_Niben261Chr15g1099006.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr15g1099006.1
nicotiana_benthamiana_Niben261Chr15g1173003.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr15g1173003.1
nicotiana_benthamiana_Niben261Chr16g0046004.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr16g0046004.1
nicotiana_benthamiana_Niben261Chr17g0400020.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr17g0400020.1
nicotiana_benthamiana_Niben261Chr17g1295011.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr17g1295011.1
nicotiana_benthamiana_Niben261Chr18g0107002.1 nicotiana_benthamiana nicotiana_benthamiana_Niben261Chr18g0107002.1