PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
nyssa_yunnanensis_maker-405-augustus-gene-2.17-mRNA-1 nyssa_yunnanensis nyssa_yunnanensis_maker-405-augustus-gene-2.17-mRNA-1
nyssa_yunnanensis_maker-408-augustus-gene-5.4-mRNA-1 nyssa_yunnanensis nyssa_yunnanensis_maker-408-augustus-gene-5.4-mRNA-1
nyssa_yunnanensis_maker-438-augustus-gene-0.4-mRNA-1 nyssa_yunnanensis nyssa_yunnanensis_maker-438-augustus-gene-0.4-mRNA-1
nyssa_yunnanensis_maker-617-augustus-gene-1.11-mRNA-1 nyssa_yunnanensis nyssa_yunnanensis_maker-617-augustus-gene-1.11-mRNA-1
nyssa_yunnanensis_maker-944-augustus-gene-56.4-mRNA-1 nyssa_yunnanensis nyssa_yunnanensis_maker-944-augustus-gene-56.4-mRNA-1
ochroma_pyramidale_OCHPYR00401_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR00401_OCHPYR
ochroma_pyramidale_OCHPYR00549_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR00549_OCHPYR
ochroma_pyramidale_OCHPYR00851_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR00851_OCHPYR
ochroma_pyramidale_OCHPYR01364_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR01364_OCHPYR
ochroma_pyramidale_OCHPYR03947_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR03947_OCHPYR
ochroma_pyramidale_OCHPYR03948_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR03948_OCHPYR
ochroma_pyramidale_OCHPYR05692_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR05692_OCHPYR
ochroma_pyramidale_OCHPYR06510_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR06510_OCHPYR
ochroma_pyramidale_OCHPYR08783_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR08783_OCHPYR
ochroma_pyramidale_OCHPYR11296_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR11296_OCHPYR
ochroma_pyramidale_OCHPYR12896_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR12896_OCHPYR
ochroma_pyramidale_OCHPYR15930_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR15930_OCHPYR
ochroma_pyramidale_OCHPYR16932_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR16932_OCHPYR
ochroma_pyramidale_OCHPYR17927_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR17927_OCHPYR
ochroma_pyramidale_OCHPYR20407_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR20407_OCHPYR
ochroma_pyramidale_OCHPYR20408_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR20408_OCHPYR
ochroma_pyramidale_OCHPYR20410_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR20410_OCHPYR
ochroma_pyramidale_OCHPYR21441_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR21441_OCHPYR
ochroma_pyramidale_OCHPYR22452_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR22452_OCHPYR
ochroma_pyramidale_OCHPYR28770_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR28770_OCHPYR
ochroma_pyramidale_OCHPYR29998_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR29998_OCHPYR
ochroma_pyramidale_OCHPYR30662_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR30662_OCHPYR
ochroma_pyramidale_OCHPYR31916_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR31916_OCHPYR
ochroma_pyramidale_OCHPYR31984_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR31984_OCHPYR
ochroma_pyramidale_OCHPYR34508_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR34508_OCHPYR