PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
origanum_vulgare_123930.g3.t1 origanum_vulgare origanum_vulgare_123930.g3.t1
origanum_vulgare_124341.g4.t1 origanum_vulgare origanum_vulgare_124341.g4.t1
origanum_vulgare_125883.g117.t1 origanum_vulgare origanum_vulgare_125883.g117.t1
origanum_vulgare_126456.g5.t1_126456.g6.t1 origanum_vulgare origanum_vulgare_126456.g5.t1_126456.g6.t1
origanum_vulgare_127519.g4.t1 origanum_vulgare origanum_vulgare_127519.g4.t1
origanum_vulgare_157508.g5.t1 origanum_vulgare origanum_vulgare_157508.g5.t1
origanum_vulgare_206305.g4.t1 origanum_vulgare origanum_vulgare_206305.g4.t1
origanum_vulgare_258.g62.t1 origanum_vulgare origanum_vulgare_258.g62.t1
origanum_vulgare_264.g223.t1 origanum_vulgare origanum_vulgare_264.g223.t1
origanum_vulgare_264.g54.t1 origanum_vulgare origanum_vulgare_264.g54.t1
origanum_vulgare_264.g541.t1 origanum_vulgare origanum_vulgare_264.g541.t1
origanum_vulgare_269.g288.t1 origanum_vulgare origanum_vulgare_269.g288.t1
origanum_vulgare_272.g25.t1 origanum_vulgare origanum_vulgare_272.g25.t1
origanum_vulgare_304.g128.t1 origanum_vulgare origanum_vulgare_304.g128.t1
origanum_vulgare_304.g129.t1 origanum_vulgare origanum_vulgare_304.g129.t1
origanum_vulgare_304.g133.t1 origanum_vulgare origanum_vulgare_304.g133.t1
origanum_vulgare_304.g134.t1 origanum_vulgare origanum_vulgare_304.g134.t1
origanum_vulgare_304.g137.t1 origanum_vulgare origanum_vulgare_304.g137.t1
origanum_vulgare_395.g14.t1 origanum_vulgare origanum_vulgare_395.g14.t1
origanum_vulgare_458.g3.t1.6.5db0b523 origanum_vulgare origanum_vulgare_458.g3.t1.6.5db0b523
origanum_vulgare_476.g109.t1 origanum_vulgare origanum_vulgare_476.g109.t1
origanum_vulgare_476.g325.t1 origanum_vulgare origanum_vulgare_476.g325.t1
origanum_vulgare_507.g793.t1 origanum_vulgare origanum_vulgare_507.g793.t1
origanum_vulgare_530.g84.t1 origanum_vulgare origanum_vulgare_530.g84.t1
origanum_vulgare_826.g158.t1 origanum_vulgare origanum_vulgare_826.g158.t1
origanum_vulgare_854.g6.t1 origanum_vulgare origanum_vulgare_854.g6.t1
origanum_vulgare_85564.g1.t1 origanum_vulgare origanum_vulgare_85564.g1.t1
Oropetium_20150105_00012A oropetium_thomaeum Oropetium_20150105_00012A
Oropetium_20150105_00607A oropetium_thomaeum Oropetium_20150105_00607A
Oropetium_20150105_01365A oropetium_thomaeum Oropetium_20150105_01365A