PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Cmolctg02180167610.1 castanea_mollissima Cmolctg02180167610.1
Cmolctg02910196950.1 castanea_mollissima Cmolctg02910196950.1
Cmolctg10260319750.1 castanea_mollissima Cmolctg10260319750.1
castanopsis_hystrix_GWHPBWDD008143 castanopsis_hystrix castanopsis_hystrix_GWHPBWDD008143
casuarina_equisetifolia_CCG011917 casuarina_equisetifolia casuarina_equisetifolia_CCG011917
casuarina_equisetifolia_CCG021757 casuarina_equisetifolia casuarina_equisetifolia_CCG021757
Cglascaffold1520046800 casuarina_glauca Cglascaffold1520046800
Cglascaffold1520046810 casuarina_glauca Cglascaffold1520046810
Cglascaffold3290145240 casuarina_glauca Cglascaffold3290145240
Cglascaffold4790186370 casuarina_glauca Cglascaffold4790186370
Cglascaffold800242110 casuarina_glauca Cglascaffold800242110
Cnit2168200056520 catagonium_nitens Cnit2168200056520
Cnit2610980231980 catagonium_nitens Cnit2610980231980
catharanthus_roseus_CRO_T002169 catharanthus_roseus catharanthus_roseus_CRO_T002169
catharanthus_roseus_CRO_T002410 catharanthus_roseus catharanthus_roseus_CRO_T002410
catharanthus_roseus_CRO_T011168 catharanthus_roseus catharanthus_roseus_CRO_T011168
catharanthus_roseus_CRO_T011682 catharanthus_roseus catharanthus_roseus_CRO_T011682
catharanthus_roseus_CRO_T014527 catharanthus_roseus catharanthus_roseus_CRO_T014527
catharanthus_roseus_CRO_T027939 catharanthus_roseus catharanthus_roseus_CRO_T027939
Clenscf_130015490.1 caulerpa_lentillifera Clenscf_130015490.1
CEame01G0044860 cenchrus_americanus CEame01G0044860
CEame03G0010320 cenchrus_americanus CEame03G0010320
CEame03G0050970 cenchrus_americanus CEame03G0050970
CEame03G0051170 cenchrus_americanus CEame03G0051170
CEame06G0048510 cenchrus_americanus CEame06G0048510
CEame07G0003850 cenchrus_americanus CEame07G0003850
cenchrus_fungigraminus_GWHPBWDX012080.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX012080.1
cenchrus_fungigraminus_GWHPBWDX017643.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX017643.1
cenchrus_fungigraminus_GWHPBWDX025182.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX025182.1
cenchrus_fungigraminus_GWHPBWDX028683.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX028683.1