PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
GBG80277 chara_braunii GBG80277
GBG80500 chara_braunii GBG80500
Cf012287.mRNA1 chenopodium_giganteum Cf012287.mRNA1
CquiC_Quinoa_Scaffold_18170125370.1 chenopodium_quinoa CquiC_Quinoa_Scaffold_18170125370.1
CquiC_Quinoa_Scaffold_24930214400.1 chenopodium_quinoa CquiC_Quinoa_Scaffold_24930214400.1
Calb1570023490.1 chiococca_alba Calb1570023490.1
Calb1910063370.2 chiococca_alba Calb1910063370.2
Calb2580138810.1 chiococca_alba Calb2580138810.1
Calb3100178230.1 chiococca_alba Calb3100178230.1
Calb3100178230.2 chiococca_alba Calb3100178230.2
Crei04G0002980.1 chlamydomonas_reinhardtii Crei04G0002980.1
Cses03G0001460.1 chloranthus_sessilifolius Cses03G0001460.1
Cses06G0009470.1 chloranthus_sessilifolius Cses06G0009470.1
Cses08G0003370.1 chloranthus_sessilifolius Cses08G0003370.1
Cacipscaffold_3760164780 chorisodontium_aciphyllum Cacipscaffold_3760164780
Czof07G0000430.1 chromochloris_zofingiensis Czof07G0000430.1
Cnanutg15233_pilon_pilon0080820.1 chrysanthemum_nankingense Cnanutg15233_pilon_pilon0080820.1
Cnanutg16658_pilon_pilon0104040.1 chrysanthemum_nankingense Cnanutg16658_pilon_pilon0104040.1
Cnanutg18181_pilon_pilon0125050.1 chrysanthemum_nankingense Cnanutg18181_pilon_pilon0125050.1
Cnanutg18875_pilon_pilon0134140.1 chrysanthemum_nankingense Cnanutg18875_pilon_pilon0134140.1
Cnanutg25054_pilon_pilon0226980.1 chrysanthemum_nankingense Cnanutg25054_pilon_pilon0226980.1
Cnanutg44908_pilon_pilon0381990.1 chrysanthemum_nankingense Cnanutg44908_pilon_pilon0381990.1
Cnanutg67173_pilon_pilon0480140.1 chrysanthemum_nankingense Cnanutg67173_pilon_pilon0480140.1
CsetCse_sc011622.10628580 chrysanthemum_seticuspe CsetCse_sc011622.10628580
CsetCse_sc012197.10647480 chrysanthemum_seticuspe CsetCse_sc012197.10647480
CsetCse_sc018049.10822030 chrysanthemum_seticuspe CsetCse_sc018049.10822030
CsetCse_sc019763.10865550 chrysanthemum_seticuspe CsetCse_sc019763.10865550
CsetCse_sc021406.10904520 chrysanthemum_seticuspe CsetCse_sc021406.10904520
CsetCse_sc028033.11040530 chrysanthemum_seticuspe CsetCse_sc028033.11040530
CsetCse_sc028892.11055370 chrysanthemum_seticuspe CsetCse_sc028892.11055370