PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Avestig00010605_pilon0217560.1 aldrovanda_vesiculosa Avestig00010605_pilon0217560.1
alstonia_scholaris_tjs10488 alstonia_scholaris alstonia_scholaris_tjs10488
alstonia_scholaris_tjs12568 alstonia_scholaris alstonia_scholaris_tjs12568
alstonia_scholaris_tjs13028 alstonia_scholaris alstonia_scholaris_tjs13028
alstonia_scholaris_tjs13962 alstonia_scholaris alstonia_scholaris_tjs13962
alstonia_scholaris_tjs25508 alstonia_scholaris alstonia_scholaris_tjs25508
alstonia_scholaris_tjs25713 alstonia_scholaris alstonia_scholaris_tjs25713
alstonia_scholaris_tjs27287 alstonia_scholaris alstonia_scholaris_tjs27287
alstonia_scholaris_tjs31772 alstonia_scholaris alstonia_scholaris_tjs31772
alstonia_scholaris_tjs34907 alstonia_scholaris alstonia_scholaris_tjs34907
AcruScioBoG_102835_HRSCAF_1030590021130.1 amaranthus_cruentus AcruScioBoG_102835_HRSCAF_1030590021130.1
AMhypScaffold_40156790.1 amaranthus_hypochondriacus AMhypScaffold_40156790.1
AMhypScaffold_80217840.1 amaranthus_hypochondriacus AMhypScaffold_80217840.1
AMhypScaffold_90232780.1 amaranthus_hypochondriacus AMhypScaffold_90232780.1
MAKER_03325-RA amaranthus_palmeri MAKER_03325-RA
MAKER_04543-RA amaranthus_palmeri MAKER_04543-RA
MAKER_09735-RA amaranthus_palmeri MAKER_09735-RA
MAKER_20959-RA amaranthus_palmeri MAKER_20959-RA
amaranthus_tricolor_g12667.t1 amaranthus_tricolor amaranthus_tricolor_g12667.t1
amaranthus_tricolor_g1653.t1 amaranthus_tricolor amaranthus_tricolor_g1653.t1
amaranthus_tricolor_g21196.t1 amaranthus_tricolor amaranthus_tricolor_g21196.t1
amaranthus_tricolor_g9826.t1 amaranthus_tricolor amaranthus_tricolor_g9826.t1
At.03g087470-v1.1.a1 amaranthus_tuberculatus At.03g087470-v1.1.a1
At.04g182970-v1.1.a1 amaranthus_tuberculatus At.04g182970-v1.1.a1
At.04g183040-v1.1.a1 amaranthus_tuberculatus At.04g183040-v1.1.a1
At.04g183050-v1.1.a1 amaranthus_tuberculatus At.04g183050-v1.1.a1
At.04g183060-v1.1.a1 amaranthus_tuberculatus At.04g183060-v1.1.a1
AtriAmTr_v1.0_scaffold000450124520.1 amborella_trichopoda AtriAmTr_v1.0_scaffold000450124520.1
AtriAmTr_v1.0_scaffold000590151020.1 amborella_trichopoda AtriAmTr_v1.0_scaffold000590151020.1
AnanContig000100003540.1 ammopiptanthus_nanus AnanContig000100003540.1