PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Jmicscaffold60550288270.1 juglans_microcarpa Jmicscaffold60550288270.1
Jmicscaffold62060293730.1 juglans_microcarpa Jmicscaffold62060293730.1
Jmicscaffold62900296430.1 juglans_microcarpa Jmicscaffold62900296430.1
Jmicscaffold66190309000.2 juglans_microcarpa Jmicscaffold66190309000.2
Jmicscaffold66280309150.1 juglans_microcarpa Jmicscaffold66280309150.1
Jmicscaffold70000325600.1 juglans_microcarpa Jmicscaffold70000325600.1
Jmicscaffold71660331660.1 juglans_microcarpa Jmicscaffold71660331660.1
Jmicscaffold72230333810.1 juglans_microcarpa Jmicscaffold72230333810.1
Jmicscaffold72470334360.1 juglans_microcarpa Jmicscaffold72470334360.1
Jmicscaffold79210354980.1 juglans_microcarpa Jmicscaffold79210354980.1
Jmicscaffold79650355840.1 juglans_microcarpa Jmicscaffold79650355840.1
Jmicscaffold80490358490.1 juglans_microcarpa Jmicscaffold80490358490.1
Jmicscaffold85350371480.1 juglans_microcarpa Jmicscaffold85350371480.1
Jmicscaffold85350371550.1 juglans_microcarpa Jmicscaffold85350371550.1
Jmicscaffold85780372640.1 juglans_microcarpa Jmicscaffold85780372640.1
Jmicscaffold87230375910.1 juglans_microcarpa Jmicscaffold87230375910.1
Jmicscaffold88000377410.1 juglans_microcarpa Jmicscaffold88000377410.1
Jmicscaffold89490381640.1 juglans_microcarpa Jmicscaffold89490381640.1
Jmicscaffold90190383670.1 juglans_microcarpa Jmicscaffold90190383670.1
Jmicscaffold90400384030.1 juglans_microcarpa Jmicscaffold90400384030.1
Jmicscaffold93030390740.1 juglans_microcarpa Jmicscaffold93030390740.1
Jmicscaffold93800392880.1 juglans_microcarpa Jmicscaffold93800392880.1
Jmicscaffold93890393160.1 juglans_microcarpa Jmicscaffold93890393160.1
Jmicscaffold94740396480.1 juglans_microcarpa Jmicscaffold94740396480.1
Jmicscaffold9890411150.1 juglans_microcarpa Jmicscaffold9890411150.1
Jmicscaffold99000411800.1 juglans_microcarpa Jmicscaffold99000411800.1
Jmicscaffold99260412740.1 juglans_microcarpa Jmicscaffold99260412740.1
juglans_microcarpa_x_regia_XP_040985808.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_040985808.1
juglans_microcarpa_x_regia_XP_040987627.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_040987627.1
juglans_microcarpa_x_regia_XP_040987728.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_040987728.1