PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Mdom07G0014890.1 malus_domestica Mdom07G0014890.1
Mdom12G0009750.1 malus_domestica Mdom12G0009750.1
Mx01G0008450.1 malus_x_domestica Mx01G0008450.1
Mx03G0010390.1 malus_x_domestica Mx03G0010390.1
Mx03G0010400.1 malus_x_domestica Mx03G0010400.1
Mx04G0008190.1 malus_x_domestica Mx04G0008190.1
Mx05G0000290.1 malus_x_domestica Mx05G0000290.1
Mx07G0014890.1 malus_x_domestica Mx07G0014890.1
Mx12G0009750.1 malus_x_domestica Mx12G0009750.1
Mind03G0011870.1 mangifera_indica Mind03G0011870.1
Mind05G0007070.1 mangifera_indica Mind05G0007070.1
Mind07G0007780.1 mangifera_indica Mind07G0007780.1
Mind08G0005660.1 mangifera_indica Mind08G0005660.1
Mind08G0005670.1 mangifera_indica Mind08G0005670.1
Mind08G0005720.1 mangifera_indica Mind08G0005720.1
Mind08G0005730.1 mangifera_indica Mind08G0005730.1
Mind08G0013100.1 mangifera_indica Mind08G0013100.1
Mind13G0007410.1 mangifera_indica Mind13G0007410.1
Mind15G0013440.1 mangifera_indica Mind15G0013440.1
Mind19G0004950.1 mangifera_indica Mind19G0004950.1
Mind19G0004960.1 mangifera_indica Mind19G0004960.1
Mind19G0004970.1 mangifera_indica Mind19G0004970.1
Mesc04G0001760.1 manihot_esculenta Mesc04G0001760.1
Mesc04G0001760.2 manihot_esculenta Mesc04G0001760.2
Mesc07G0010320.1 manihot_esculenta Mesc07G0010320.1
Mesc08G0001080.1 manihot_esculenta Mesc08G0001080.1
Mesc09G0006510.1 manihot_esculenta Mesc09G0006510.1
Mesc10G0004650.1 manihot_esculenta Mesc10G0004650.1
Mesc16G0009910.1 manihot_esculenta Mesc16G0009910.1
Mpol01G0004860.1 marchantia_polymorpha Mpol01G0004860.1