PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Msin01G0040610.1 miscanthus_sinensis Msin01G0040610.1
Msin03G0011170.1 miscanthus_sinensis Msin03G0011170.1
Msin03G0015640.1 miscanthus_sinensis Msin03G0015640.1
Msin04G0025290.1 miscanthus_sinensis Msin04G0025290.1
Msin06G0033600.1 miscanthus_sinensis Msin06G0033600.1
Msin07G0041230.1 miscanthus_sinensis Msin07G0041230.1
Msin07G0041240.1 miscanthus_sinensis Msin07G0041240.1
Msin07G0041250.1 miscanthus_sinensis Msin07G0041250.1
Msin07G0041260.1 miscanthus_sinensis Msin07G0041260.1
Msin08G0020630.1 miscanthus_sinensis Msin08G0020630.1
Msin08G0020640.1 miscanthus_sinensis Msin08G0020640.1
Msin11G0014500.1 miscanthus_sinensis Msin11G0014500.1
Msin12G0015050.1 miscanthus_sinensis Msin12G0015050.1
Msin14G0002930.1 miscanthus_sinensis Msin14G0002930.1
Msin18G0002050.1 miscanthus_sinensis Msin18G0002050.1
Msinscaffold140390058940.1 miscanthus_sinensis Msinscaffold140390058940.1
Mhor1518930003400 mnium_hornum Mhor1518930003400
Mhor1560450005070 mnium_hornum Mhor1560450005070
Mhor2375100038350 mnium_hornum Mhor2375100038350
Mhor2526100065460 mnium_hornum Mhor2526100065460
Mhor2528670066220 mnium_hornum Mhor2528670066220
Mhor2594620090840 mnium_hornum Mhor2594620090840
Mhor2677980192030 mnium_hornum Mhor2677980192030
Mhor2687900219430 mnium_hornum Mhor2687900219430
Mhor2687990219840 mnium_hornum Mhor2687990219840
Mhor2689590224510 mnium_hornum Mhor2689590224510
Mhor2689590224530 mnium_hornum Mhor2689590224530
Mhor2696630249730 mnium_hornum Mhor2696630249730
Mhor2698140256420 mnium_hornum Mhor2698140256420
Mhor2701300269640 mnium_hornum Mhor2701300269640