PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Dole02G0012460.1 diospyros_oleifera Dole02G0012460.1
Dole06G0003110.1 diospyros_oleifera Dole06G0003110.1
Dole09G0011700.1 diospyros_oleifera Dole09G0011700.1
DIPfulscaffold_20034860 diphyscium_fulvifolium DIPfulscaffold_20034860
DIPfulscaffold_80181680 diphyscium_fulvifolium DIPfulscaffold_80181680
DIPfulscaffold_80181690 diphyscium_fulvifolium DIPfulscaffold_80181690
DIPfulscaffold_80181700 diphyscium_fulvifolium DIPfulscaffold_80181700
Dcolcontig_1400040190 distichophyllum_collenchymatosom Dcolcontig_1400040190
Dcolcontig_1760072430 distichophyllum_collenchymatosom Dcolcontig_1760072430
Dcolcontig_1970096670 distichophyllum_collenchymatosom Dcolcontig_1970096670
Dcolcontig_2040106970 distichophyllum_collenchymatosom Dcolcontig_2040106970
Dcolcontig_2040107000 distichophyllum_collenchymatosom Dcolcontig_2040107000
Dcolcontig_2040107030 distichophyllum_collenchymatosom Dcolcontig_2040107030
Dcolcontig_2040107060 distichophyllum_collenchymatosom Dcolcontig_2040107060
Dcolcontig_310139840 distichophyllum_collenchymatosom Dcolcontig_310139840
Dcolcontig_310142780 distichophyllum_collenchymatosom Dcolcontig_310142780
Dcolcontig_310142820 distichophyllum_collenchymatosom Dcolcontig_310142820
Dcolcontig_310142840 distichophyllum_collenchymatosom Dcolcontig_310142840
Dcolcontig_310142900 distichophyllum_collenchymatosom Dcolcontig_310142900
Dcolcontig_310142920 distichophyllum_collenchymatosom Dcolcontig_310142920
Dcolcontig_310142930 distichophyllum_collenchymatosom Dcolcontig_310142930
Dcolcontig_310142960 distichophyllum_collenchymatosom Dcolcontig_310142960
Dcolcontig_620169930 distichophyllum_collenchymatosom Dcolcontig_620169930
Dcolcontig_630177470 distichophyllum_collenchymatosom Dcolcontig_630177470
Dcolcontig_640185120 distichophyllum_collenchymatosom Dcolcontig_640185120
Dcolcontig_640185140 distichophyllum_collenchymatosom Dcolcontig_640185140
Dcolcontig_950221250 distichophyllum_collenchymatosom Dcolcontig_950221250
Dcolcontig_950221270 distichophyllum_collenchymatosom Dcolcontig_950221270
Dcolcontig_1400040190 distichophyllum_collenchymatosum Dcolcontig_1400040190
Dcolcontig_1760072430 distichophyllum_collenchymatosum Dcolcontig_1760072430