PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Ddruscaffold320130070 dryas_drummondii Ddruscaffold320130070
Ddruscaffold400161550 dryas_drummondii Ddruscaffold400161550
Ddruscaffold4330170550 dryas_drummondii Ddruscaffold4330170550
Ddruscaffold510195070 dryas_drummondii Ddruscaffold510195070
Ddruscaffold660215810 dryas_drummondii Ddruscaffold660215810
Dsalscaffold3870094040.1 dunaliella_salina Dsalscaffold3870094040.1
XP_022729542.1 durio_zibethinus XP_022729542.1
XP_022732724.1 durio_zibethinus XP_022732724.1
XP_022742788.1 durio_zibethinus XP_022742788.1
XP_022744362.1 durio_zibethinus XP_022744362.1
XP_022744606.1 durio_zibethinus XP_022744606.1
XP_022746155.1 durio_zibethinus XP_022746155.1
XP_022746845.1 durio_zibethinus XP_022746845.1
XP_022765388.1 durio_zibethinus XP_022765388.1
XP_022767337.1 durio_zibethinus XP_022767337.1
XP_022773603.1 durio_zibethinus XP_022773603.1
echinochloa_oryzicola_GWHPBDNS008365 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS008365
echinochloa_oryzicola_GWHPBDNS019849 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS019849
echinochloa_oryzicola_GWHPBDNS026341 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS026341
echinochloa_oryzicola_GWHPBDNS026346 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS026346
echinochloa_oryzicola_GWHPBDNS026347 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS026347
echinochloa_oryzicola_GWHPBDNS026348 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS026348
echinochloa_oryzicola_GWHPBDNS026814 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS026814
echinochloa_oryzicola_GWHPBDNS032311 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS032311
echinochloa_oryzicola_GWHPBDNS032313 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS032313
echinochloa_oryzicola_GWHPBDNS043812 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS043812
echinochloa_oryzicola_GWHPBDNS044039 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS044039
echinochloa_oryzicola_GWHPBDNS048668 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS048668
echinochloa_oryzicola_GWHPBDNS051077 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS051077
echinochloa_oryzicola_GWHPBDNS055289 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS055289